ggKbase home page

LAC_acetylene_scaffold_57364_3

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(1324..2553)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q0_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 379.0
  • Bit_score: 177
  • Evalue 2.40e-41
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 393.0
  • Bit_score: 181
  • Evalue 3.60e-43
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AJE03049.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 393.0
  • Bit_score: 181
  • Evalue 1.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
GTGACAGAAATGGAAGGTAAAACCGTAGCCCCTGAGCTCGATTCCGAGGACGAAATCAGTCTCGTGGATCTAGCGGCCACGCTCTGGCGGCGCAAATGGCTCATCGTTGTCGTCACCGCGGCAGCGGCAGTGGCATCCGTGGTCTACGCGCTTGCGCAGCCCAACATCTACACGGCTTCAGCCACCATGTTGCCGATCTCCGGATCCTCAACCTCCTCCCTCCTCTCCCAGTATGCCGGTCTTGCTTCCCTGGCGGGCGTGAGCCTTCCCGCGGGGAGTTCCGCCAACCCCGCCATCAAGATCGAAGCCATTCTGAAGAGCAGAAGCTTCGCGGAAAATCTCGTCGGTAAAATGGAACTCGTGCCGATGCTGGTCGAGCATCCCGAAAAGATCAGGACGGGTACGCCTTTGGGAGCTGCTGTAAAAACTTTGCAGGGGATATTGTCAGTATCCACTGAAACCAAGACCAATGTGATGAAAATCTCGGCCAAGACCAAGGACCCCACACTTTCCAGCAGGATCACCAACGGCGCGTTGGACATGATTCAGGCCGACCTCAAGGCTCGTGTCCTTTCCTCGAGCGGCAAGAACATCATCCTCTTGGAAGAGCAGACTGCCGAACAGGAAAAAAAGGTCAGGGCGGCTCAGGCTAGGCTCACCGCCTACCAGAAAAAGAACAAGCTCGTCTCCCCCCAGGCCCAAAGCGCGGGAAGCCTTCAGCTCTACCAGGCCCTCATTCAGCAGAAAATGGCTCTGGAGATAGAGATTTCGCGTCTTGAGAGCGCCCTCTCGGCCGACAATCCCAAAATCGTATCCGCCCGTACCCAACTTTCCGCGATTCAGGCCCAGATGAAGGATTTCGAGAAAACTGGAGGAGGGGTTGGACTCTCAATGAACGAGACTCCTGCCGCGCTGATGGAATACGCGAATATCACGGCCGAGCTCGAGCTTGCGACGAAGATCTACGGTGGTCTTCTTTCCAGTTTGGAGAGCATGAAGCTCCAGGACGCCACCGAGAAAGTTTTCGTCGAAGTGATCGACAGGGCAATACCGCCCGAGACAAAGAGCGAGCCCTCGCGTTCCATGATATGCATCGTGGGCACCATGGCGGGGGGCTTTCTGTCCGTGCTTCTGGCCTTCGTGCTCGATGCCTTCGGGAAGCTTGTGGCCGACCCCGAGGTGCGCGCCAAATTCTCCGGAGGGAAGAAAGCGAAATCCTTGCGCGGCTGA
PROTEIN sequence
Length: 410
VTEMEGKTVAPELDSEDEISLVDLAATLWRRKWLIVVVTAAAAVASVVYALAQPNIYTASATMLPISGSSTSSLLSQYAGLASLAGVSLPAGSSANPAIKIEAILKSRSFAENLVGKMELVPMLVEHPEKIRTGTPLGAAVKTLQGILSVSTETKTNVMKISAKTKDPTLSSRITNGALDMIQADLKARVLSSSGKNIILLEEQTAEQEKKVRAAQARLTAYQKKNKLVSPQAQSAGSLQLYQALIQQKMALEIEISRLESALSADNPKIVSARTQLSAIQAQMKDFEKTGGGVGLSMNETPAALMEYANITAELELATKIYGGLLSSLESMKLQDATEKVFVEVIDRAIPPETKSEPSRSMICIVGTMAGGFLSVLLAFVLDAFGKLVADPEVRAKFSGGKKAKSLRG*