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LAC_acetylene_scaffold_39519_2

Organism: LAC_acetylene_BJP_IG2103_Bacteroidetes_37_22_48_12

partial RP 26 / 55 BSCG 31 / 51 ASCG 11 / 38 MC: 1
Location: 2035..2583

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0L0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 160
  • Evalue 1.30e-36
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EAY23827.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 160
  • Evalue 1.90e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 140
  • Evalue 3.10e-31

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Taxonomy

Microscilla marina → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGTTTGTAATGCTCAATCGTCTTGCTCTTGAAATGACTGCGGAAGAATTTAAACATAGCATCCTTGTTTTTAAGCAAAAGTTGTATCGCCTCGGCCTTAGGTTGCTGAACGACGAAGAGGAGGCGGCAGATGTGGTGCAGGATGTGTTTGTTAAACTTTGGAATATGCGTGAACAACTCATCCAATACAGAAGCGTTGAAGCTTTGGCAATGACGATGACGCGGAATGTGTGCCTCGACAGGCTGAAAACCCCGCATCGCATGGTCCGGTTGGGTCATCAAAGCGACCTGCAACAAGAAGCATCCAACCCTGAGTTGGCTTATGAGCTAGGTGAAACAACCGCAATCATTGCTGACTCCATACGATTATTGCCTCAGCAGCAGCAACTTGTCATGCACCTGAGGGATGTTGAACATTTTGAATTCGAAGAGATTGCGTCCATCACTGGCATGAACCTCAATCACATCAGGGTAAACCTGTCAAGGGCAAGAAAAGCAGTGCGGGAACGGTTAGTAAAACACCATAATTATGCATATCAGGGAAATTGA
PROTEIN sequence
Length: 183
MFVMLNRLALEMTAEEFKHSILVFKQKLYRLGLRLLNDEEEAADVVQDVFVKLWNMREQLIQYRSVEALAMTMTRNVCLDRLKTPHRMVRLGHQSDLQQEASNPELAYELGETTAIIADSIRLLPQQQQLVMHLRDVEHFEFEEIASITGMNLNHIRVNLSRARKAVRERLVKHHNYAYQGN*