ggKbase home page

LAC_acetylene_scaffold_51638_5

Organism: LAC_acetylene_Ignavibacteriales_40_37

near complete RP 45 / 55 BSCG 41 / 51 ASCG 7 / 38
Location: 4927..5583

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 212.0
  • Bit_score: 218
  • Evalue 9.10e-54
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C7730 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 198.0
  • Bit_score: 219
  • Evalue 2.90e-54
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 221.0
  • Bit_score: 218
  • Evalue 1.80e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGTACACAGATAAAATAATTTTGACGGATAAACCGATTGACTGGACCAGTACGGATGTTGTGAGATTCCTGAAGAAAAAACTGTCTCTTGAAAAAGTAGGCCATGCAGGAAGCCTTGACCCGCGCGCAACAGGTCTGCTGATTCTCTGCACTGATAAAATGACAAAGAGAATAAATGAATTCATGGAATGCGAAAAGGAATATCAGGGCATCATCAGAATTGGAGCAAGAACAAAATCTTACGATACCGAATCCGAAGAGGAAGATGTCAGGGAAGTGTCCGGTATTAACGGGAAAATGATTGAGGATGTCAGAAATACATTTATTGGTGAAACCGAACAGATACCACCCATGCATTCCGCTCTTAAACATAAGGGACGACCCCTTTACAAGCTCGCCAGGAAGGGCGAAACAGTGGAACTGAAAGCAAGGAAAATCGAAATCAGGGAATTCGGGATTAAAAGACTTAACAATGAAGAAATATTCTTTAATATCATCTGCAGCAAAGGTACCTATATCCGCTCAATAGCAAATGATTTCGGGGAAAAACTAGGGGTTGGCGGTTATCTCAAGGAATTGAGACGGACCAGAATCGGTATCTATGACCTCAGTAACCTTAATGAAACCGCAGGTGAAATTAAATTCTCTGCAATTTGA
PROTEIN sequence
Length: 219
MYTDKIILTDKPIDWTSTDVVRFLKKKLSLEKVGHAGSLDPRATGLLILCTDKMTKRINEFMECEKEYQGIIRIGARTKSYDTESEEEDVREVSGINGKMIEDVRNTFIGETEQIPPMHSALKHKGRPLYKLARKGETVELKARKIEIREFGIKRLNNEEIFFNIICSKGTYIRSIANDFGEKLGVGGYLKELRRTRIGIYDLSNLNETAGEIKFSAI*