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LAC_acetylene_scaffold_33125_3

Organism: LAC_acetylene_Desulfovibrio_69_12

partial RP 36 / 55 BSCG 40 / 51 ASCG 10 / 38
Location: comp(1730..2263)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM n=1 Tax=Desulfovibrio longus RepID=UPI0003B5851C similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 178.0
  • Bit_score: 173
  • Evalue 1.50e-40
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 171.0
  • Bit_score: 163
  • Evalue 2.20e-37
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 171.0
  • Bit_score: 154
  • Evalue 2.60e-35

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Taxonomy

Desulfovibrio sp. X2 → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCCGACCAAGACCAGGGACCTCGTCCTCTTGGGCGAGGTCACCAAGCCGCACGGCATCCGGGGCGAAGTCTGCGTGAAATGCCACGCGGATTCGCCGGATGTCTTTGTGCGCCTGCGCTCCGTGCTCCTGGCCCGGCCCGGGGAAGAGCCCCGGCCGGTGCGCATTCTCGGCCTGCGCCCGCACAAGGTGGGCCTCCTGTTCCGCTTGGCGGGCGTGGAGGACCGCAACCGGGCCGAGGAACTGCGCGGCAGCCGTCTTTACGCCCGGGCCGCGGACCTGCCCGCCCTGGCCGAGGACGAGGTCTACCTGCACCAGGTGGTGGGCCTGGCCGCGCACCTGCCCGACGGCAGCCGCCTGGGCGAGGTGGAGGCGGCCGACGACTCCTCGGGCCAGGAGATATGGCTCATCCGCACCGGGGACGGCCGCGAGGTGCTCCTGCCCGCGGCCTTCGTGACCGGCCTGGACCTGGATGCGGGAGTGGCCACGGTGGGCCCGCCCCCCGGGCTCCTGGAACTCTATCTCGGCGCCTAG
PROTEIN sequence
Length: 178
MPTKTRDLVLLGEVTKPHGIRGEVCVKCHADSPDVFVRLRSVLLARPGEEPRPVRILGLRPHKVGLLFRLAGVEDRNRAEELRGSRLYARAADLPALAEDEVYLHQVVGLAAHLPDGSRLGEVEAADDSSGQEIWLIRTGDGREVLLPAAFVTGLDLDAGVATVGPPPGLLELYLGA*