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LAC_acetylene_scaffold_47122_1

Organism: LAC_acetylene_Desulfovibrio_69_12

partial RP 36 / 55 BSCG 40 / 51 ASCG 10 / 38
Location: 3..3215

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 1064.0
  • Bit_score: 1296
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z0W5_DESAF similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 1064.0
  • Bit_score: 1296
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 1064.0
  • Bit_score: 1296
  • Evalue 0.0

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Taxonomy

Desulfovibrio africanus → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3213
TCCCATGGCGCAGGCCGGGCCGAATCCCGGGCCTGGACCGGCCGCTGGGCCGCGCTCTACGGCCTGGCCTTCGGCCGGGGGCCGCGCGGGGCCCTGCTCACCGTGGACAACCTGCTGCCCAAGTGGCCCTCGCCCGAGGTGCTGGCCGGGTGCAGCCTGGAGCTGGCCAAGGGCCAGGCCATGGCCCCGGGCAAGCTCCTGGAGCAGCTCGCGGCCTGGGGGTACGAGCGGGTGCGCATGGTGACCCGGCCCGGCGAGGCCGCCCTGCGCGGGGACATCCTGGACGTGCATCCCGCGGGTTTTGACGACCCCCTGCGCCTGGAATTCTTCGGCGACACCCTGGATGACCTGCGCAGCTTCGACCCGGCCACCCAGCGCTCCCGCCAGGAGGTGGCCCGGGCGGTGTTCCTGCCGGCCTCGCCCTCGCCCGGCCTGCCCGAACTGCTTGCGCCCGCAGCCGAGAAATGGCGGCGGCACAAGGCCGTGGGCGAGTTGTCCCCCCAGGCCCTGGACGAACTGGCCCGGCTGGCCGACTCCGGGGGCGCGGTGCACCCCGGCCTGTACTACCAGGACGCGGTGCTCCTCGCGGACTGGCTGCCCCGGGACGCGATCTGGCTCCTGTGCGGGGCAGGGCAGTTGCGCACCCGGCTGGAGGAGGCCGAGTGGGACTGGAGCCAGTGGCTGGATGAGGAGTGGCGCGTGGGCTCCCGGCGCTGGCCCCGGGGCGCGCTCGTCCAGACCGCCGAGGGCGCGCGCACGTCCTGGGTGGACAAGAGCCAGGTGCTCTTCGAGGACCTGACCATGGGCGCGGAGCGCAAGGGCCTGGACCTGCCCGAACGCCCCCTGCACGAGTTCTCCGAACTGTTCTGGAAGCCCGAGCACAAGGAGCGGCCCTGGCACGCCCTGGTGGAGGCCATGAAGCTCTGGGAGCGGGAGCGGCCCCAGGTGCTCCTCTCGTTCCGCTCCGAGGGGGCGCGCAAGAAATTCCTCACCCTGGCCGGCCAGGAGGGGGTGCTTCCCTCCACGGCCTACCGGCCCGACTCCCGCGGCCTGTTCGCCCTGGTCTCGCCCCTGCGCAAGGGCTACGACCTGGCCTGGAGCGGGACCCTGATCCTGGCCGAGGACGTGCTCCAGCCCCGGCCCGTCGAGGCCCGCGTCGGTCGGGACAAGGCCTTCAAAGGCCTGGCCGAGCACGAGGACCTGTCCCCGGACGACCTGTTGGTGCACCGGGACTGGGGGGTATGTCGCTTCGACAACCTGACCCGGCTCACCGTGGGCAGCGTGACCGGCGATTACCTGCTCCTGCGCTTTGCCGGCGACGACCGGCTCTACCTGCCCGTGGACCGCATGAACCTGGTGCAGCGCTACAAGGGGCCGGACGGCGCGGCCCCGGCCCTGGACCGGCTGGGCGGGGCCAGCTTCGCCCGGACCAAGGGCCGGGTGCGCAAGGCCCTGGAGCGGGTGGCCCAGGAGCTGGTGGAGATGTACGCCTACCGCCGGCTGGCCAAGGGATTCGCCTACGGGGACCTGAACGAGCTGTTCTGGGAGTTCGAGGCCTCCTTCGGGTTCGAGGAAACCCCGGACCAGGAACGGGCCATTGCCGAGGTGCTGGAGGACATGGGCCGGCCCGAGCCCATGGACCGCCTGGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCCATGCGCGCCGCCTTCCGCGCCGCCCTGGACGGCAAGCAGGTGGCGCTGTTGTGCCCCACCACGATCCTGGCCGAGCAGCACTATCAGAACTTCAAGCGACGCTTGAAGGATTTCCCCATCAACGTGGCCATGCTCTCCCGCTTCGTGTCCAAGGAGCGGCAGAAGGCCGTGCTGGCCGCCGCGGCCAAGGGCCGGGTGGACATCCTCATCGGCACCCACCGCCTGCTCTCCAAGGATGTGGATCTGCCCAACCTAGGACTGCTGGTCCTGGACGAGGAGCAGCGCTTCGGGGTCAAGCACAAGGAGCGGCTCAAGCAGTTCCGCAAGACCATCGACGTGCTCACCCTGACCGCCACCCCCATCCCGCGCACCCTCCAGCTCTCCCTGGCCGGGCTGCGCGGCCTGTCGGTCATCGAGACCCCGCCGGTGGACCGCAAGCCGGTGGCCACCTTCCTCATCGAGCGCGACGACGCCGAGTTGGCGGGCATCCTCCAGCGCGAGCTGGCGCGCCAGGGCCAGGTGTTCTGGGTGCACAACCGGGTGCAGGGCCTGGAGGACGTGGCGTCCTACGTGCGCCGCCTGGCCCCGGGCGCGCGGGTAGGCATGGCCCACGGCCAGATGGCGGAGCACGCCCTGGAAGAGGCCATGCACCAGTTCTGGCACGGCGAGCTGGACATCCTGGTGTGCACCGCCATCATCGAGTCCGGCCTGGACTTCCCCCGGGCCAACACCCTGGTGGTGGACCAGGCCCACATGTTCGGCCTGGGCCAGCTCTACCAGCTGCGCGGCCGGGTGGGCCGCTCCGACCGCCAGGCCTTCGCCTGCTTCGTGATCCCCAGCCTGGACCACCTGCCCGAGCAGGCCCGCAAGCGGCTCCAGGTCATCCTGGACATGGACTACCTGGGAGCGGGCTTCCAGGTGGCCATGGAGGACCTGCGCCTGCGCGGGGCCGGCAACATCCTGGGCGAGGCCCAGTCCGGGGTGGCGGCCAAGGTGGGCCTGGACCTCTACCTGGAGATGCTGGAGGAGGAGGTGCGCCGGCAGCGGGGCGAGGGCGCGCGCGCCGAACACGTGGAGCCGGAGCTGACCATCGGCTTCCCGGCCCGGCTGCCCGAGAGCTATATCGGCGATTCGCGGGAGCGCCTGGGCCTGTACAAGTCCCTGTCCTCGGCCGTGGACCGGCACGGCATCGAGGAGGTGGCCGGGGAGATGCGCGACCGCTTCGGCCCCCTGCCCACCGAGGCCGAGTCCTTCGTGGCCGTGCTTTCGCTCAAGCGCCTGCTCTCCCGGCTGCGGGTGGTGGCGGCGGACCTCTATCCGGGACGGGCGGTGCTCACCTGGAAACCCGACGATGCCGGAGTCGACCCCGCGGCGCTCCTGCCCTGGGTCACGGCCCGGCCGGGCAGCGCCAAGCTCATGCCTCCGGCCAAGTTGGAGTTGCGCATTCCGGAAAAGCAGTCTATCCGCGAGTCCATGCAATACGTGGAAGACGAACTGCGCGTCCTGCTCCCGGAGGCCCCGGCATGA
PROTEIN sequence
Length: 1071
SHGAGRAESRAWTGRWAALYGLAFGRGPRGALLTVDNLLPKWPSPEVLAGCSLELAKGQAMAPGKLLEQLAAWGYERVRMVTRPGEAALRGDILDVHPAGFDDPLRLEFFGDTLDDLRSFDPATQRSRQEVARAVFLPASPSPGLPELLAPAAEKWRRHKAVGELSPQALDELARLADSGGAVHPGLYYQDAVLLADWLPRDAIWLLCGAGQLRTRLEEAEWDWSQWLDEEWRVGSRRWPRGALVQTAEGARTSWVDKSQVLFEDLTMGAERKGLDLPERPLHEFSELFWKPEHKERPWHALVEAMKLWERERPQVLLSFRSEGARKKFLTLAGQEGVLPSTAYRPDSRGLFALVSPLRKGYDLAWSGTLILAEDVLQPRPVEARVGRDKAFKGLAEHEDLSPDDLLVHRDWGVCRFDNLTRLTVGSVTGDYLLLRFAGDDRLYLPVDRMNLVQRYKGPDGAAPALDRLGGASFARTKGRVRKALERVAQELVEMYAYRRLAKGFAYGDLNELFWEFEASFGFEETPDQERAIAEVLEDMGRPEPMDRLVCGDVGFGKTEVAMRAAFRAALDGKQVALLCPTTILAEQHYQNFKRRLKDFPINVAMLSRFVSKERQKAVLAAAAKGRVDILIGTHRLLSKDVDLPNLGLLVLDEEQRFGVKHKERLKQFRKTIDVLTLTATPIPRTLQLSLAGLRGLSVIETPPVDRKPVATFLIERDDAELAGILQRELARQGQVFWVHNRVQGLEDVASYVRRLAPGARVGMAHGQMAEHALEEAMHQFWHGELDILVCTAIIESGLDFPRANTLVVDQAHMFGLGQLYQLRGRVGRSDRQAFACFVIPSLDHLPEQARKRLQVILDMDYLGAGFQVAMEDLRLRGAGNILGEAQSGVAAKVGLDLYLEMLEEEVRRQRGEGARAEHVEPELTIGFPARLPESYIGDSRERLGLYKSLSSAVDRHGIEEVAGEMRDRFGPLPTEAESFVAVLSLKRLLSRLRVVAADLYPGRAVLTWKPDDAGVDPAALLPWVTARPGSAKLMPPAKLELRIPEKQSIRESMQYVEDELRVLLPEAPA*