ggKbase home page

LAC_acetylene_scaffold_54373_1

Organism: LAC_acetylene_Desulfovibrio_69_12

partial RP 36 / 55 BSCG 40 / 51 ASCG 10 / 38
Location: comp(2..2296)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GA60_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 605.0
  • Bit_score: 764
  • Evalue 8.50e-218
Signal transduction histidine kinase {ECO:0000313|EMBL:KHK03280.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 604.0
  • Bit_score: 768
  • Evalue 6.30e-219
two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 605.0
  • Bit_score: 750
  • Evalue 2.80e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio sp. TomC → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
CTGCGCGGGCAGGCCGAGGCCGCCTTGCAGGCCTACCTGGCCGCACTCGAGCGGGGGCCGGAGGAGCCCCGGCTCCTGGCCGGGGCTGCCCGCATGGCCTTGCAGCGGGGCCTCCTGGACACGGCCCGGGACTGCCTGCGCCGGCTGCTCCGCGAGAGCCCCGGAGACCTGGAGGCGCGCAGGCTGATGGCCCAGGTGGAGCTGCGCCGCTCCCGACCTGCGGCCGCGGAGGCCTGGCTGCGCCGCGGGCTGGAGATCAACCCGCGGCACAACGTCTTCCACTACGAGCTGGCCCTCGTCCTGGCCGGCCGGGAGGCCTGGACCCCGGCTCGGGAGCACTTCGCGGCCTCCGTGGGAGTGAACCCGGACTTCGACGCCAACGCGAACTACCAGCTCGGGCTCGCGTGCCTGCGCCTGGGCGAGGTCCCGGCGGCCCACCAGGCCTTCCGCGCCGCCACGAACGCCAACCCGCGCCTGGCGATGCCTTGGTACCTCCTGGGGCTCCTGCTCCGGGACATGGGCTACGAGGTGTCCACCGCTGCCAACGGCGACGAGGCCCTGCGCCTGGTGACGGCCGCGGCCCCGGACATCGTGCTCACGGACATCAAGATGCCGGGCATGGACGGCATCGAGCTTTTGCGCCGCATCAAGGCCCACTCTCCGGCAATCGAAGTGGTCATGATCTCCGGGCACGGGGACATGGAGCTGGCCATCCAGAGCCTCCAACTGGAGGCCGCGGACTTCGTGACCAAGCCGGTCAACGACGAAATCCTGGCCGCCACCCTGCGCCGGGTCAGCGAAAAGCTGGCCATGAAGCGCCAGATCAAATCCTACACCGAGAACCTGGAAGAGATGGTCCGGGAGAAGTCCGCCCGGGTCCTGGAACTGGAGCGGGAACTGGCCGCCACCCAGGTGGTGGACGCGGTGTGCCGGGGCATGCACTCCCTGGGCTCCGAGTCCCTGCCCGAGGGGGTGTTCAACAACCTCCCCTGCCTCATGGCCGTGCATAACCGCGACCTGGAGGTGGTCACCTGCAACCAGCTCTACCTGGAGCGGGTGGGCGACAAGGTGGGCCTGAGCAGCCTGGAGGCCTACCAGACCGAAACCGGCCTGGACAACCCGGTGCAGCGCACCTTCGAGACCGGCCGCGGCCAGCGCGCCCGGGCCACCTTCCGGGATCCCGCCGGCAACCCCCTGCCCATGGAGGTATTCACCTCCCCGGTTTCCCACAAGGACGGCCAGGTGGAACTGGTCCTGGAGATGGCCCTGGACATGAGCGAACTCTCCCGCCTGCGCGAAGAACTGCGGGTGGCCCAGGAGAAGTACCAGGACCTGTTCGAGCAGACCCCCTGCTACATCGCGGTGCGCGACCGGGAGTTCCGCATCGTGGCCAACAACCGCCGCTTTGCCCAGGACTTCGGGGAAGGCGCGGGCCGCTTCTGTTACGAGGCCTTCAAGCACCGCGCCGATCCCTGCCCGGACTGCAGCAGCAAGGCGACCTTCGAGGACGGCCAATCCCACCCCCACGAGGCGGTGGTCACCACCCTGGACGGCCGCAAGCTGCACGTGCTCTCCTGGTCCGCTCCCATCCGCGACGCGCGGGGCGAGGTGGTGGAGGTCATGGAGATGTCCACGGACATCACCCAGATCCGCCAGCTCCAGGACCACCTGACCTCCCTGGGGCTCATGCTGGGCTCCATGTCGCACGGGGTCAAGGGCATGCTCACCGCCCTGGAGGGCGGAGTCTACCGCCTGGAATCCGGGCTCAAGCGCCAGGACCTGGCCCGCATCGCGGACGCGGCCGAGTCGGTGAAGCAGCTCACCGGCCGCATCAAGAACCTGGTGCTCAACGTGCTCTACTATGCCAAGTCCCGGGACCTGGCCGCGGAAGAGGCCGACCTGACCGAGTTCTGCAAGCAGGTGGTCGAGGTGGTGGCGCCCAAGGCCGAGCGGGAGAAGATCGCCTTCGCCGCGGACTTCCCCCCGGACCTGGGCCGCTTCTCGGCGGACGTGGCCAACCTCTCGGCCGCCCTGGTGAACATCCTGGAGAACGCCATCGACGCCTGCGTGGCGGACCACGCCAAGCCCGAACACCGCATCGGCTTCGCGGTGCGGGCCGCGGACGGGTCCGTGGACATCGAGATCGCGGACAACGGCATGGGCATGGACCAGGAAACCCGGGAAAAGGCCCTCACCCTGTTCTTCTCGTCCAAGGGCCTGCGCGGCACGGGCCTGGGCCTGTTCATCGCCAACGACGTGGTCACCAAGCACCAGGGCAGCATGTCCCTGGAATCC
PROTEIN sequence
Length: 765
LRGQAEAALQAYLAALERGPEEPRLLAGAARMALQRGLLDTARDCLRRLLRESPGDLEARRLMAQVELRRSRPAAAEAWLRRGLEINPRHNVFHYELALVLAGREAWTPAREHFAASVGVNPDFDANANYQLGLACLRLGEVPAAHQAFRAATNANPRLAMPWYLLGLLLRDMGYEVSTAANGDEALRLVTAAAPDIVLTDIKMPGMDGIELLRRIKAHSPAIEVVMISGHGDMELAIQSLQLEAADFVTKPVNDEILAATLRRVSEKLAMKRQIKSYTENLEEMVREKSARVLELERELAATQVVDAVCRGMHSLGSESLPEGVFNNLPCLMAVHNRDLEVVTCNQLYLERVGDKVGLSSLEAYQTETGLDNPVQRTFETGRGQRARATFRDPAGNPLPMEVFTSPVSHKDGQVELVLEMALDMSELSRLREELRVAQEKYQDLFEQTPCYIAVRDREFRIVANNRRFAQDFGEGAGRFCYEAFKHRADPCPDCSSKATFEDGQSHPHEAVVTTLDGRKLHVLSWSAPIRDARGEVVEVMEMSTDITQIRQLQDHLTSLGLMLGSMSHGVKGMLTALEGGVYRLESGLKRQDLARIADAAESVKQLTGRIKNLVLNVLYYAKSRDLAAEEADLTEFCKQVVEVVAPKAEREKIAFAADFPPDLGRFSADVANLSAALVNILENAIDACVADHAKPEHRIGFAVRAADGSVDIEIADNGMGMDQETREKALTLFFSSKGLRGTGLGLFIANDVVTKHQGSMSLES