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LAC_acetylene_scaffold_19320_5

Organism: LAC_acetylene_Coriobacteriales_65_1583

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(4725..5510)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Atopobium RepID=N2BT86_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 256.0
  • Bit_score: 298
  • Evalue 4.50e-78
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 262.0
  • Bit_score: 286
  • Evalue 5.00e-75
Tax=BJP_08E140C01_Coriobacteriales_62_12 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 261.0
  • Bit_score: 429
  • Evalue 3.10e-117

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Taxonomy

BJP_08E140C01_Coriobacteriales_62_12 → Coriobacteriales → Coriobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGCCTAGGCGTTCAAAGCGGCCGGAGCGCCGTCTCGTCTGGGATAAGGCCCACACGCGGCAGCTGTTCATCCTGTACCGGGAGACAGGTGACGAGGCGGCCCGGGACGAGCTCATCACGATGTATCTCAATCTCGTGAAATACCTCGCGAGCCGTTTCCGCAACCGCGGCGAGCCCATCGACGACCTGATCCAGGTCGGCACGATCGGCCTCATCAAAGCCATCGACCGCTTCGACACATCGCGCCAGGTGGAGTTCACAACGTATGCCACCCCAACGATTGTCGGCGAACTCAAGCGCCACTTCCGCGACAAGGGCTGGGCGATCAAGGTTCCCCGCCGCCTGCAGGAACTCTCCTTCAAGGTTAACCAGGCAGTCGACGCGCTCACCCAGCAGTTTCAACGTTCTCCCACCATCGCGGAGATCGCCGAGTATCTGGGCGTAACGTCTGAAGACGTGCTTGAAGCATTTGAGACGTCTGAGGCGTACAATTTTGTCTCTCTCGAGACCGATCGTAACAGCGACGGCTCGGAGGGATTCAGCATTCTCGAGTACATCGGCGAGGATGACCAGCTGATGGCGCTCGTTGACGATCGCGCGACGCTGGCGGTGGCGCTGAAGTCACTCGAGCCGCAGGAACAGCACGTGCTCTACCTGAGGTTCTTCCAGGGCCTCTCACAGACCGAGATCGCGACGGAGTTGGGCATTTCGCAGATGCAGGTATCGCGGCTTCTGCGAAAGACACTTCATTCGCTTCGCGAACACATCGTCATGGAGGAAGTCTAG
PROTEIN sequence
Length: 262
VPRRSKRPERRLVWDKAHTRQLFILYRETGDEAARDELITMYLNLVKYLASRFRNRGEPIDDLIQVGTIGLIKAIDRFDTSRQVEFTTYATPTIVGELKRHFRDKGWAIKVPRRLQELSFKVNQAVDALTQQFQRSPTIAEIAEYLGVTSEDVLEAFETSEAYNFVSLETDRNSDGSEGFSILEYIGEDDQLMALVDDRATLAVALKSLEPQEQHVLYLRFFQGLSQTEIATELGISQMQVSRLLRKTLHSLREHIVMEEV*