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LAC_acetylene_scaffold_38085_166

Organism: LAC_acetylene_Firmicutes_46_580

near complete RP 48 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(170447..171631)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein id=1757395 bin=GWE2_Firmicute_51_13 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 394.0
  • Bit_score: 389
  • Evalue 2.20e-105
pilC; type IV fimbrial assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 394.0
  • Bit_score: 297
  • Evalue 3.30e-78
Tax=GWF2_Firmicutes_51_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 394.0
  • Bit_score: 388
  • Evalue 9.20e-105

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Taxonomy

GWF2_Firmicutes_51_9_curated → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCAGACCTACAAAGTGACCGCCCTCAATCAAGGGGGTAAGAAAATCAAGGAAACCATCGTCACAGACAATCAAAGCGAAATCTTCAGTACATTGAAGGAACGTTCGCTTTACCTGGTCGAGATCAAGCAAGTGACCGCTAGCACCAAAGACCGTTTCAAAGTCAAAGACCTGATCGTTTTCACCCGGCAAATGGGAACGATGGTTGCGGCTGGTCTTTCGATCCTCAAGGCATTGCACATCATCCAGGGACGGATCACGAGTCCGGTCATCAAAAAGGTTTACATCAACCTGGCACAAGATATCCAAAAAGGGAATGCCTTATCCGTCGCGATGAAAAATCAAGGTGGCGCCTTCCCTGAAATCCTGATCAATATGGTAGAAGCTGGTGAAATCGGCGGTACCTTGGATCGCTCATTATCTCTGATGTCGAACCATTTCGACAAGGAACTCAAACTGAAAAATAAGATCAAAGCCGCTAGCACTTATCCGGTCATCCTGGCCGTCGTATCGGTAGCTGTCGTAGTCCTTTTGGTTACCTTCGTCCTTCCCAACATCACCAACATGTTTGAGGAAGATGAACTTCCGGCTTTGACCAAAATGGTCATGGACTTCAGTCACTTCCTGACAGGTTACTGGTATCTCATCATCGGCGCCGTCTTCGGAGTGATGACCTTGATTCCGTTCCTGCTCAATCAACAAGAAATACGCTACCGCTTTGACGGAATGCTTCTACGGCTTCCCGTGCTTGGCAAGCTTAATCGGACCATCTATTCATCACGTTGCGCGCGTTCTTTCTCATCACTTTACCTCAGTGGTATCCAGACCTTGCCAATGATCCAATCGACGGCCAAGATCCTCAACAATTCTTTCATCGAGCGCAGTTTCGTCATCGTCGCCTACCGCGTATCGCAAGGCGAACCTATTTCAAAATCGATTGATGATGCGAACGTCTTTGATCCGATGTTGGCATCCATGATCAATGTCGGGGAAGAAACCGGTGCTTTGGGGGAAATCCTGGTCTCTACCGCTGAGTACTTCGACGGAGAGGCGGATGCCGCTTTACAGAAAATGTTATCGCTTATGGAACCCATCATGTTAATCGTGATGGGCGTCATCATTGGTATAATCGTTGTCTCATTCATGTTACCGATGTTCACCATGAATGAAGCGATCCTGAACTGA
PROTEIN sequence
Length: 395
MQTYKVTALNQGGKKIKETIVTDNQSEIFSTLKERSLYLVEIKQVTASTKDRFKVKDLIVFTRQMGTMVAAGLSILKALHIIQGRITSPVIKKVYINLAQDIQKGNALSVAMKNQGGAFPEILINMVEAGEIGGTLDRSLSLMSNHFDKELKLKNKIKAASTYPVILAVVSVAVVVLLVTFVLPNITNMFEEDELPALTKMVMDFSHFLTGYWYLIIGAVFGVMTLIPFLLNQQEIRYRFDGMLLRLPVLGKLNRTIYSSRCARSFSSLYLSGIQTLPMIQSTAKILNNSFIERSFVIVAYRVSQGEPISKSIDDANVFDPMLASMINVGEETGALGEILVSTAEYFDGEADAALQKMLSLMEPIMLIVMGVIIGIIVVSFMLPMFTMNEAILN*