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LAC_acetylene_scaffold_11146_27

Organism: LAC_acetylene_BJP_08E140C01_Actinomycetales_67_18_67_465

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(27848..28444)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WAM3_KINRD similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 200.0
  • Bit_score: 158
  • Evalue 5.50e-36
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 200.0
  • Bit_score: 158
  • Evalue 1.60e-36
Tax=BJP_08E140C01_Actinomycetales_67_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 198.0
  • Bit_score: 387
  • Evalue 6.00e-105

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Taxonomy

BJP_08E140C01_Actinomycetales_67_18 → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGTTACCTCCCGGCCCGGATCGGACATTCCTGGACGTGGAGACCATCAGCGATGCAGCCATCTGGGCCGAGGTGCTGGCCGGTGAGCCGGACGGGATGGGCGTGATCTGGGATCGGCACCGCGACCGGGTGTTCCGGCACCTTCGCGGGGCCGGCGCCGGGACGACGGAAGCCGAGGACCTGACCGCCGTCACCTTCCTGGAGCTGTGGCGTCGACGTACGGCGGTGCGCTTCGTGGACGACTCGCTGCTGCCGTGGCTGCTGGTGACGGCCAGCAATGTGGCCCGCAACGCGACTCGCTCCCAGCGGCGCTACCAGGCGTTTCTGGCGCGGTTGCCGAAGCCTGAGTCCACCGACGGGCCGGAGGCGGAGCCGTCCTCACAGCGTGGGGAGGCGTTGGCGCGCAGTTGGCCGTCGGTCGGCCGACTCGACCGCCAACTGCTGATGCTCACCGCCGTCGAAGGCTTCTCAGTGGCCGAGGCCGCCGAGGTTCTGGGACTGACTGAGGCCGCAGCCAAGATGCGGCTGAGCAGGACGCGCAAACGTCTGCACACCTCGATTGATGACCAATTGCTTGCCGAAGGAGAACTGGCATGA
PROTEIN sequence
Length: 199
VLPPGPDRTFLDVETISDAAIWAEVLAGEPDGMGVIWDRHRDRVFRHLRGAGAGTTEAEDLTAVTFLELWRRRTAVRFVDDSLLPWLLVTASNVARNATRSQRRYQAFLARLPKPESTDGPEAEPSSQRGEALARSWPSVGRLDRQLLMLTAVEGFSVAEAAEVLGLTEAAAKMRLSRTRKRLHTSIDDQLLAEGELA*