ggKbase home page

LAC_acetylene_scaffold_41557_127

Organism: LAC_acetylene_BJP_08E140C01_Actinomycetales_67_18_67_465

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(134850..135356)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG47_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 166.0
  • Bit_score: 161
  • Evalue 7.20e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 166.0
  • Bit_score: 161
  • Evalue 2.00e-37
Tax=BJP_08E140C01_Actinomycetales_70_11 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 166.0
  • Bit_score: 198
  • Evalue 4.40e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Actinomycetales_70_11 → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGTTCGGGTCATCCACCCCCGCGAGAGATGCCGAGTTCACCGAGTTCGTGACGTCGGCCTCCGCGTCCTTGGGACGAACGGCCTACCTGCTCACCGGTGACCACCACCTGGCCGCCGACCTGGTGCAAGAGGCGATGGTCAAGACCTACCTGGCGTGGGGACGAGTCCGTCCCGGCGAAGCTCAGGCTTACGCCCGGCGGGTGTTGGTGAACCTCAACATCGACCGCTGGCGGCGCCGTCCGGCCCAGCCCAGCGACGAGATCGACCAGGTGAGCGGCAGTGACGAAGGCCAGGTCGATGATCGCGACCAGGTCGTGCGGGCCTTGGCCGAGTTGCCGGCTCAGCAGCGGCGGGTGATCGTCCTGCGTTATCTGGAGGACCTGTCCGAGGCTGAGGTGGCCACACAGCCGGGGGTCAGCGTTGGGGCCGTGAAATCTGCCTGTTCGCGCGGGCTTGCGACGTTGCGAGAAAGCCACGCCGCTGCGACGGAAGGGATGTTGGGATGA
PROTEIN sequence
Length: 169
MFGSSTPARDAEFTEFVTSASASLGRTAYLLTGDHHLAADLVQEAMVKTYLAWGRVRPGEAQAYARRVLVNLNIDRWRRRPAQPSDEIDQVSGSDEGQVDDRDQVVRALAELPAQQRRVIVLRYLEDLSEAEVATQPGVSVGAVKSACSRGLATLRESHAAATEGMLG*