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LAC_acetylene_scaffold_44189_4

Organism: LAC_acetylene_BJP_08E140C01_Actinomycetales_67_18_67_465

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(1819..2592)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V119_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 248.0
  • Bit_score: 209
  • Evalue 2.70e-51
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 156.0
  • Bit_score: 99
  • Evalue 8.60e-19
Tax=BJP_08E140C01_Actinomycetales_67_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 257.0
  • Bit_score: 502
  • Evalue 2.80e-139

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Taxonomy

BJP_08E140C01_Actinomycetales_67_18 → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGGCCTTCACCGAGGATCAGCTCACCGCCGCCCTACCGGGCCTGTGGAGCTATGCCCGCGTGCTGACCCACGACGAGGACGCGGCCGCCGAGCTCGTCCAGGAGACCGCCCTCGCTGCGTGGGAGAAGGCCGATCAGTTCCGCGGCGAGGCGAGTGCGGCCACCTGGCTGCATCGGATCATGTATCACCGCTTCATCGACGCGACTCGGCGACGCCTCCCCGTCCCGGTGGCCGACGAGGAACTGGTGGCCGCGAACGAGCGGGCTTGGGCCGATGACGCCTACACCGTGGCTGCGGACGTGGTGTTGGAGCGCGCCGAGGACCGAGACGCCTTGTTGGAAGCGTTGATCCGGGTGCCGGCCAGTCACCGGGCTGCCGTCCTGCTGCACGACCTGGAGGGCATGACCGCCGCCGAAGTGGCCCAGGTGCAGCGGATCGGCCTCCCGGCCGCCAAGCAACGAATCCGGCGCGGGCGCCAATTGCTGGTCAGCGCGCTGGCCGCAGGTGTCGAGCGGCGCGCCGTTCTCGGCGACGTTCCGCTGAACTGTTGGACGGCTCGCAGCCGCATCTTGGACTACCTCGACGACGAACTGACCGCGGCCGAGCGCACTCAGGTCGAGCTGCACCTGGCCGGATGCCCGACCTGCCCGGCGTTGTACGCCTCCATCGTCAGCGTCACCGATGCCCTGGCCGCCATGCGCGACCCGGACTCGGTGATTCCGGAGTGGATCGCCGATCGGGTCCGGGCCACGGTGTCTCCGGGCGGGAAGTGA
PROTEIN sequence
Length: 258
VAFTEDQLTAALPGLWSYARVLTHDEDAAAELVQETALAAWEKADQFRGEASAATWLHRIMYHRFIDATRRRLPVPVADEELVAANERAWADDAYTVAADVVLERAEDRDALLEALIRVPASHRAAVLLHDLEGMTAAEVAQVQRIGLPAAKQRIRRGRQLLVSALAAGVERRAVLGDVPLNCWTARSRILDYLDDELTAAERTQVELHLAGCPTCPALYASIVSVTDALAAMRDPDSVIPEWIADRVRATVSPGGK*