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LAC_acetylene_scaffold_24036_2

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 831..2204

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XS39_DESMR similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 458.0
  • Bit_score: 739
  • Evalue 1.30e-210
sigA; RNA polymerase sigma factor SigA similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 458.0
  • Bit_score: 739
  • Evalue 3.80e-211
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 458.0
  • Bit_score: 739
  • Evalue 1.90e-210

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Taxonomy

Desulfovibrio sp. U5L → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGAGTAACATCAAGGAAATCCAGCAGATCAAGACCCTGATCGCCCAGGGTAAGAAAAAGGGCTTTCTGACCTTCGACGAGGTCAACAAGGCCCTGCCGGCGGAGATCAACAAGCCCGAGCAGATCGAGGAGATCATCGGGGTCTTCGACCAGCTCAACATCGCCATCGTGGACACGGAAAAGGACGCCAAGTCCCTGGACCTCATGTCCTCCGAGGGGGACGAGGAGGTCGCCGAGGCCCCGGTGGCCGACCTGGAGCTCATAGAGACCGAAGATTCGGCCGACTACGCCTCGCGCAGTACCGACCCGGTGCGCATGTATTTGCGCGAGATGGGCGCGGTGCCGCTCCTGGACCGGGAGGGCGAGGTCTACATCGCCAAGAAGATCGAGAACGGCGAGATGGAGGTGCTCTTCGCCCTGGTGGAGGTGCCGGTGGCCATCGAGGAGCTCGTCCTGGTGGGCGACGACCTCAAGCAGGGCCGCATCAAGCTCAAGGACGTGGTCAAGACCATCGAGGAGGACGATCCCAGCGAGGACGAGATGAACCAGCGCCAGCGGGTCATCTTCCTGCTCGACGAGATCAAGTCCATCTACCGCAAGAAGAAGAAGATCTACGGCAAGCTGGACCAGTGCGCCACCCTGGACCGCCGGGTGGCCGGGGTCCAGAACGAGGTGTTGGGCTTCAAGGACGAGGTGGTCCGCCGGCTGCGCGACATCAAGCTGGAGAAGACCCTCATCGACCAGATCATCGAGACCGTGGAGGACTACGTGCGGCAGATGCACAACTGCCAGCGCGACCTCTCGGCCTACATCCTGGCCACCGGGCTGCCCCAGGCCGAGATCAAGACCATCTTCCGCCAGATCGACAGCCGGGAGATAAATCCGGTGCTGGCTGCGGACAAGCTCTCCATGACCGTGGAGGAGGTCTTCTCCTTCAAGGAGATGCTCGCGGGCAAGATGGAGATCCTGGTGCGCCTCCAGGAGAAGTGCTGCCACGAGGTGGACGACCTGGAAGAAGTGCTCTGGCGCATCAAGCGCGGATCGGACGCCGCCTCCCGGGCCAAGCAGGAGCTCATCCGGGCCAACCTGCGCCTGGTGGTGTCCATTGCCAAGAAGTACACCAACCGCGGCCTCCAGTTCCTGGACCTGATCCAGGAGGGCAACATCGGGCTCATGAAGGCCGTGGACAAGTTCGAGTACCAGCGCGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATCCGCCAGGCCATCACCCGCGCCATCGCGGACCAGGCCCGGACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGCTCATCCGCACCTCCCGCTACCTGGTGCAGGAGCTTGGCCGCGACCCCACC
PROTEIN sequence
Length: 458
MSNIKEIQQIKTLIAQGKKKGFLTFDEVNKALPAEINKPEQIEEIIGVFDQLNIAIVDTEKDAKSLDLMSSEGDEEVAEAPVADLELIETEDSADYASRSTDPVRMYLREMGAVPLLDREGEVYIAKKIENGEMEVLFALVEVPVAIEELVLVGDDLKQGRIKLKDVVKTIEEDDPSEDEMNQRQRVIFLLDEIKSIYRKKKKIYGKLDQCATLDRRVAGVQNEVLGFKDEVVRRLRDIKLEKTLIDQIIETVEDYVRQMHNCQRDLSAYILATGLPQAEIKTIFRQIDSREINPVLAADKLSMTVEEVFSFKEMLAGKMEILVRLQEKCCHEVDDLEEVLWRIKRGSDAASRAKQELIRANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGRDPT