ggKbase home page

LAC_acetylene_scaffold_27270_1

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 191..940

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 247.0
  • Bit_score: 300
  • Evalue 2.10e-78
Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LG30_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 247.0
  • Bit_score: 300
  • Evalue 1.50e-78
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 247.0
  • Bit_score: 300
  • Evalue 4.20e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGATGATACGACTCCAGAAAATACTCGCGCAGGCGGGGGTGGCTTCGCGCCGCGCTTCCGAGGAGATGATCCGGCAGGGCCGGGTGACGGTGAACGGTCAGGTTGTGACGGAAATGGGGTCCGGGGCCGACCCCGACCATGACGAGATCCGGGTGGACGGGAACCCCGTGGTGCCCGCCGCCCGAAAGGTCTATCTGCTGTTGAACAAGCCGGGGGGGTGCGTCACGACCTTTCGGGATCCTCAGGGCCGGAAGACGGTCTTCGATTACATCCCGGAGGGAGGGGAGCGGGTCTTCCCGGTGGGACGGCTTGACTACGACGCCGAGGGGCTCCTCATCCTCACCAACGACGGACCCCTGGCCAATCGTCTCCAGCATCCCCGCTACGGGGTTTCGAAAATCTACGAGGTCAAGGTGGCCGGAGTGCCGGACGAGCGCGCTCTCGGCAAGCTCCGGAGCGGCGTGCGCCTGAGGGAGGGGGTCACGGCGCCTGCCAGGGTTGAAGTTATCAGTTGCCTCCCAAATTCGTGCTGGCTTAGAATTGTCCTTCATCAGGGGTGGTATCGGCAGATCAAACGCATGGGCGAAGCCGTTGGTCACCTCGTCCAGAAGATCCGGCGCGTGGCATACGGTCCTCTCGTGCTGGGGAATGTCAAACCCGGTGCATTCCGAATGCTGAGCCGACATGAAGTGCAGGCTCTGCACCGGGCGGCGAACGTCCCATCCCGGAACCCGGAATCGAAACCATGA
PROTEIN sequence
Length: 250
MMIRLQKILAQAGVASRRASEEMIRQGRVTVNGQVVTEMGSGADPDHDEIRVDGNPVVPAARKVYLLLNKPGGCVTTFRDPQGRKTVFDYIPEGGERVFPVGRLDYDAEGLLILTNDGPLANRLQHPRYGVSKIYEVKVAGVPDERALGKLRSGVRLREGVTAPARVEVISCLPNSCWLRIVLHQGWYRQIKRMGEAVGHLVQKIRRVAYGPLVLGNVKPGAFRMLSRHEVQALHRAANVPSRNPESKP*