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LAC_acetylene_scaffold_37655_1

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 3..2930

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 976.0
  • Bit_score: 1639
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RPOC_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 976.0
  • Bit_score: 1639
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 976.0
  • Bit_score: 1639
  • Evalue 0.0

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2928
CTCTTCAAGCCCTTCATCTACAACAAGCTCGAGGAAAAGGGCCTGGTGGCCACCATCAAGGCCGCCAAGAAGCTTGTCGAGAAGGAAACCCCGGAAGTCTGGGATACCCTGGATGAAGTGGTGCGCGAATTCCCGGTGATGCTCAACCGTGCTCCGACCCTGCACCGGCTGGGCATCCAGGCCTTCGAACCGCTGCTCATCGAAGGCAAGGCCATTCAGCTCCACCCCCTGGTCTGCACGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCGGTTCACGTGCCCCTCTCGATCGAGGCTCAGACCGAGGCGCGCGTCCTCATGATGTCCACGAACAACATCCTGAGCCCGGCGCACGGCGATCCCATCATCGTGCCGTCGCAGGACATCGTTCTCGGCATCTACTACATGACGCGGGAGAAAGTCGGCGCGCGCGGGGAAGGGCGGATCTTCTCGAACCCCGGCGAAGTGCGTTCGGCCTATGACGCCCGGGAGACCGAACTGCATTCGAAGGTCAAGGTCCGGATGAACGGCGGACTGGTCGACACCACTGTGGGCCGGGTGCTCCTCTCGGAGATCCTTCCGGACAACGTGCCGTTCGGTGCCATCAACAAGATCATGACCAAGAAGGCGCTGGCGGGGCTCATCGACCATTCGTACCGGACGGCGGGGGTCAAGGCCACGGTGGTTCTGGCCGACCGTCTGAAGGACCTGGGCTACGAGTTCGCCACCAAGTCGGGCATTTCCATCTCGATTGCCGACATGGTTATCCCGCAGCGCAAGCCCGAAATCCTCTCGGTGGCCTTCGAACAGGTGAAGGAGATCGACCGGCAGTACAACGAGGGTCTCATCACCGAGGGTGAGAAGTACAACAAGGCGGTGGACATCTGGGCCAAGGCGACGGAAGACGTGGCCCTCGAGATGATGCAGGAGATCGCCACCAAGGAACTTCCCGGGGCGGAAGGCGAGGTGAAGGCGCTCGAGGCCTTCAACCCCATCTACATGATGGCGGATTCCGGCGCGCGCGGCAGTAAGGACCAGATGCGGCAGCTCGCAGGCATGCGCGGACTCATGGCCAAGCCCTCGGGTGAAATCATTCCGACCCCCATCACGGCCAACTTCCGTGAGGGGCTGACGGTGCTCCAGTACTTCATCTCGACCCACGGCGCGCGGAAGGGTCTCGCGGATACGGCTCTCAAGACGGCCAACTCGGGGTATCTCACCCGGCGACTGGTGGACGTTTCGCAGGACGTGATCATCTCGGAGATCGATTGCGGCACGGTGGACGGGATCCAGGTGGAGGCGTTGCTCGAGGCGGGTGAAATCATCCAGCGGCTGGGAGAACGCATCCTGGGGCGCATCACCCTCGAGGACATAACCGACCCGGTGACCAACGAGGTCTTGATTCCGTCCAACACGGAAATCGATGAAAAGAGCGTGCAGATCATCGACGACGCGGGCATCGAAAAGGTGCTCATCCGTTCGGCCCTGACCTGCAAGAGCCAGCGAGGGGTCTGCGCCATGTGCTACGGGCGCGACCTGGCGCAGGGGAAGATCGTGGACATCGGCGAAGCCATCGGCATCATCGCCGCGCAGTCCATCGGTGAACCTGGAACACAGCTCACCATGCGTACCTTCCACATCGGTGGAACGGCGAGCCGGAGCGTCGAGCGATCTTCGATCAACAACCGGTATCCCGGGATTGTGAAGTTCATCAACCTGAACACGGTGCGCAATCGTGAAGGCGATCTGGTGGCCATGAACCGAAACGGCGAAATCGCCGTGGTGAGCGAGGCGGGGCGGGAACGCGAACGCTACGTCATCACCTACGGCGCCAAGGTCAAGGTTTCGGACGGGAAGATGGTGGAAGTGGACACGCTGATCGCCGAATGGGACCCCTTCACCACGCCGATCCTGACGGAAGTCAAGGGCGGAGTGAAGTTCGGGGACATCGTCGAAAACCAGACGATGCAGGAAAAGCTCGATCCGGTGACCAACCGCTCGAGCAAGGTCATCGTCGAGTATCGTGAAGGGGACGTGCGGCCCCGTATCTCCATCAAGGACGAGAAGGGACGCACTGCCAGGGTGAACGAGGGCTACGCGCGGTACTTCATGCCCGTGGGCGCCATCCTCATGGTGACCGAAAGCGACGAGGTCTTCCCGGGAGACGTTCTGGCGAGAATTCCGCGGGAAACCACGAAGACCAAGGACATCACGGGCGGTCTTCCGAGAGTCGCGGAGCTGTTCGAGGTGCGCAAGCCGAAGGAAAACGCGGTCATCACGGAAATCGAAGGGACCGTGAGCTTCGGCAAGGACACCAAGGGGAAGCGGAAGGTCATCGTGACCCCGGATGTTGGCGAAGCGCGCGAGTACCTGATTCCCAAGGGCAAGCACATCAGCGTGCATGAAGGTGACTACGTGCGCGCCGGTGAACCGCTCATGGACGGCTCGCCCAATCCGCACGACATCCTGACGGTTCTTGGTGAAAAGGAAGTGGCCAAGTACCTGGTGGATGAAGTGCAGCAGGTCTACCGACTGCAGGGCGTTAAGATCAACGACAAGCACATCGAAGTGATCGTGCGGCAGATGTTGAAGCGCGTGCGCATCACCGAGCCGGGCGAGTCGGAATACCTGGTGGGCGAGTTTGTCGAGAAGCCTCTTTTCGAAGAGGAGAACGACCGGCTGGCCGCGGAGGGCAAACGTCCGGCGCAGGCCGAACCGCTGCTGCTCGGCATCACCAAGGCGTCGCTCTCGACACAGAGCTTCATTTCCGCGGCTTCGTTCCAGGAAACGACGAAGGTGCTCACCGACGCGGCCACGGCCGGGAAGGTGGACTACCTGCTGGGCCTCAAGGAAAACGTCATCATGGGACGGCTGATACCGGCCGGAACGGGGTTGAAGTCGTATCGGGAGATTCGGAAATAG
PROTEIN sequence
Length: 976
LFKPFIYNKLEEKGLVATIKAAKKLVEKETPEVWDTLDEVVREFPVMLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQTEARVLMMSTNNILSPAHGDPIIVPSQDIVLGIYYMTREKVGARGEGRIFSNPGEVRSAYDARETELHSKVKVRMNGGLVDTTVGRVLLSEILPDNVPFGAINKIMTKKALAGLIDHSYRTAGVKATVVLADRLKDLGYEFATKSGISISIADMVIPQRKPEILSVAFEQVKEIDRQYNEGLITEGEKYNKAVDIWAKATEDVALEMMQEIATKELPGAEGEVKALEAFNPIYMMADSGARGSKDQMRQLAGMRGLMAKPSGEIIPTPITANFREGLTVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVSQDVIISEIDCGTVDGIQVEALLEAGEIIQRLGERILGRITLEDITDPVTNEVLIPSNTEIDEKSVQIIDDAGIEKVLIRSALTCKSQRGVCAMCYGRDLAQGKIVDIGEAIGIIAAQSIGEPGTQLTMRTFHIGGTASRSVERSSINNRYPGIVKFINLNTVRNREGDLVAMNRNGEIAVVSEAGRERERYVITYGAKVKVSDGKMVEVDTLIAEWDPFTTPILTEVKGGVKFGDIVENQTMQEKLDPVTNRSSKVIVEYREGDVRPRISIKDEKGRTARVNEGYARYFMPVGAILMVTESDEVFPGDVLARIPRETTKTKDITGGLPRVAELFEVRKPKENAVITEIEGTVSFGKDTKGKRKVIVTPDVGEAREYLIPKGKHISVHEGDYVRAGEPLMDGSPNPHDILTVLGEKEVAKYLVDEVQQVYRLQGVKINDKHIEVIVRQMLKRVRITEPGESEYLVGEFVEKPLFEEENDRLAAEGKRPAQAEPLLLGITKASLSTQSFISAASFQETTKVLTDAATAGKVDYLLGLKENVIMGRLIPAGTGLKSYREIRK*