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LAC_acetylene_scaffold_6898_1

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(62..1825)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VTH3_DESAO similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 427.0
  • Bit_score: 505
  • Evalue 4.20e-140
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 427.0
  • Bit_score: 505
  • Evalue 1.20e-140
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADU62150.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 427.0
  • Bit_score: 505
  • Evalue 5.90e-140

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Taxonomy

Desulfovibrio aespoeensis → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1764
ATGGCCAGGGTGTTGATTATCGATGACGACGTGCTGGTGCGAAAGAGCCTGTCGCGGCTCTTCGAAGACATGGGGCACGAGGTGTTGCCCGCGGAAGACCTGGCGGCGGGAATGGCGCTGGCCGAGACCGGCGTCGATGTGGTCTATCTCGACCTGGATCTGCCGGACGGCGACGGACTCGAGGCCATCGACAACCTGACCGCCACGGCCTGGCATCCGGAAGTCATCGTCATCACGGGCATGGGGGCGAGCCACGGCGCGCAGAGGAGTCTCCAGAGTCATGCCTGGGACTACATTCCCAAGCCGGCTTCACCCGTGACCGTGAGGGAATCCCTCCGGAGCGCCCTGCACTACCGCGGGCAGACCCGGCGCGAACACGCGGTGACGGAGCGGTTCGAGTGCCCCGAGATCCTGGGCGGGGACCTTTCCATGCGAAGCGCGTTGCACGATATTGCGGGGGCCGCCCGGAGCGATGCAAGCGTTCTGGTCATGGGCGAGACGGGCGTGGGGAAGGAACTGGCCGCGAGGGCCATCCACGGCAACAGCCGGCGGAGCGGAGCGCCCTTCGTCGTGGTGGACTGCTCGAGCATGACGGACACGCTGGCCGAAAGCGTGCTGCACGGGCACGTCAAGGGTTCCTTCACGGGGGCCCACACCGACCGGCGGGGACTGGTGGCGGAAGCGGACGGCGGGACGCTCTTCCTGGACGAAATCGGCGAACTCTCGCCTTCCTTGCAGAAATCCTTCCTGCGGGTGCTCCAGGAACGCCGGTACCGCCCCGTGGGGTCCAACAGGGAACTGCCGAGCGACTTCCGGGTGGTGGCGGCCACCCATCGCGACCTGGATGAAATGGTGCGGGAGGGCGCCTTTCGAAGCGATCTGCTGTTTCGGATCAGGACGGTCGAAATCGTGCTGCCGCCGCTCCGGGAGCGGGGCGGGGATCGGGACCGGCTGGCCGCGCACTTCGTCGAGAAGGCCTGCCTGCGCTATGGTCTCAAGGTGAAGGGCATCTCCCGGGAACTCGCGAAGCTGGTCGGCCGGTACCCGTGGCCCGGAAACGTCCGGGAACTGGCAAACGTCATGGAGGCCGCCGTCATCCGCGCGGGACGAGACCCCGTGATCTACCCCAAGCACCTGCCCACCCACGTGCGCATGACCTTCCTGGACGACCGGGAAAAGAAGGGGCGGAAGCCCGACCACTCCCCCGAGACGGGAACATGCGCGCCCGAAGCGGGAACCCCGGCGCCCGAAGCGGCACGCCCGGTGTCCGGCGAGGCAACCCCGGTATCCGGGGCGCCGAATCCAGCGGCCGAGGCGGGAACCCTGGTGCCGAGGAGGGCAAACCTCGTGTCCAGAACGGAACCCCCCGCGCTCGCACCCGCAGCCCCGGTGCCCGGGGTGGCGGTCCCTGTGTCCGAGGCCTCAACCCCGGTGCCGGGGATGCCGACCCCGGTGCCCGATGCGGGGATCACGATGAGCGGCACGGAAAGCCCTGTCCCCGCGGCGACAAACCCGGTGCCCGAGAGGCCGGTCCTTACGCCCGGGACGACGCCCGACGCGGCCGAGGACTCGCCTGCGGTATCACTCTACGCCGAACACAAGGCCAGCTTCGACCGCGACTATTTCACCCGCCTCCTGGAGTCCACCCGTTACGACATCACCAGGGCCAGCCTCATCTCGGGGCTCAGCATCCCCACCATGTACCGCCACCTCGCCCGAGCCGGCATAGCCACCAAACGCCCCGCAAACCAATCCCGCCGGTAG
PROTEIN sequence
Length: 588
MARVLIIDDDVLVRKSLSRLFEDMGHEVLPAEDLAAGMALAETGVDVVYLDLDLPDGDGLEAIDNLTATAWHPEVIVITGMGASHGAQRSLQSHAWDYIPKPASPVTVRESLRSALHYRGQTRREHAVTERFECPEILGGDLSMRSALHDIAGAARSDASVLVMGETGVGKELAARAIHGNSRRSGAPFVVVDCSSMTDTLAESVLHGHVKGSFTGAHTDRRGLVAEADGGTLFLDEIGELSPSLQKSFLRVLQERRYRPVGSNRELPSDFRVVAATHRDLDEMVREGAFRSDLLFRIRTVEIVLPPLRERGGDRDRLAAHFVEKACLRYGLKVKGISRELAKLVGRYPWPGNVRELANVMEAAVIRAGRDPVIYPKHLPTHVRMTFLDDREKKGRKPDHSPETGTCAPEAGTPAPEAARPVSGEATPVSGAPNPAAEAGTLVPRRANLVSRTEPPALAPAAPVPGVAVPVSEASTPVPGMPTPVPDAGITMSGTESPVPAATNPVPERPVLTPGTTPDAAEDSPAVSLYAEHKASFDRDYFTRLLESTRYDITRASLISGLSIPTMYRHLARAGIATKRPANQSRR*