ggKbase home page

LAC_acetylene_scaffold_43248_2

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(1275..3635)

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase, alpha subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP28_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 782.0
  • Bit_score: 756
  • Evalue 1.80e-215
Marine sediment metagenome DNA, contig: S01H4_C00464 {ECO:0000313|EMBL:GAG72663.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 780.0
  • Bit_score: 774
  • Evalue 9.10e-221
formate dehydrogenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 782.0
  • Bit_score: 756
  • Evalue 5.20e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 2361
ATGAGCAACGAGACCATCACCTTGACGGTGCACGGCAAGGAGGGGCGGCCGAAGACCGTTCGCGGAAAGGCCGGGCAAACCCTGCTCGAGATCTTCCGGGAAAACGGCATCAGGCTCCCGACCCTTTGCCACCATCCCAAAATGCCCCCGTACGGGGGATGCCGCCTTTGCATCGTCGAAATCGAACAGGTCCGCGGGTTCCCCTCGAGCTGTTCCACCACGGCCCTGGACGGCATGGTCGTCCACACCCATTCGGAACGGGTCGTGGCCATCCGCAAGACCATGCTCGAACTCCTCCTGGCTTTCGGAGAACACAACTGCCTCCTCTGCGAACGGTCCGGAACCTGCGAACTCCAGGACCTCGTCTACGAACACCGCATCGACACCGTCCGCTTCAGGACGAGCCGCCCGCCCAGGCCCCTGGATGACGCCAACTCCATGATCGTCAGGGATCCGAACAAGTGCGTCCTGTGTGCCCGTTGCGTGCGCGGATGCCTGGACGTGCAGGTGAACGGTGCCATCGACATGAGCAACCGCGGAGTGGATACGGTCATTTCCACCTTTGACGGCTCCCCGCTGGGCGAATCCAATTGCAGGTTCTGTGGAGAGTGCGTCTCGCTTTGTCCGACCGGGGCGCTCGCCTTCAAGGAGGCCCGCTTCCGGGGACGGCCGTGGGAGCTTCGCGCCGTCGCCACCACCTGCACGCACTGCGGCGTCGGGTGTCAGCTCGAACTGAACGTCAAGGACAACAAGGTGGTGAAGGTCACCACAAACCCGAACATCCAGGGGCCCAACCGGGGAAGCCTTTGCGTCAGGGGCCGGTTCGAATTCGATTTCATCCATCACCCGGACCGGCTGAAGACGGCCCTCGTGCGTGAGCGGGGCGGATTTCGGCAGGCGTGCTGGGACGAAACCCTGGACCGCCTGGCCGGAGAATTCGGGCGCATTCGGAAGGAACACGGGCCGGATGCCCTGGCCTTCGTGGCCTCGCCCCGGTGCACCAACGAGGAGAATTATCTCCTCGCAAAGTTTGCCCGGGCCGTCATCGGGACCAACAACATCGGCCAGATCCCGCGTCCGGGGGCGGGCCGGTGCATGGTGGATGGACTGGCCGACGCCTTCGGGTTCGGGGCCATGACCAACCCCATCGAGGATTTCGAGAAGGCGGATGTGATCCTCATCGCCGGCGCCGACGCCTCGGAGACCCATCCCGTCATCTCGAGCGCTTTCAAACGGGCGGCCAGAAATGGACACACCCGCCTCCTGGTGGTGGATTCCAACCACACGGAACTGGCCGACTTCGCGCGCATCAGGCTCCGCCCCAAGCCGGGCACGGACGTCATGTGGATGAACGGTCTGGCCCACGTCATCATTGCCGAAGGACTTCTCGATCGGGCTTTCGTCGAGGACCGCACGGAAGGCTACGAAGCGTTCCGGCGGACCGTCGCGACCTACACGCCCGAGCGGGTCGAACTCCAGGCGGGGATTCCCGTGGAGGACCTGCTGGCCGCTGCGCGGCTCTACGCGGGAGCGGCCCGAGGGTCCATCGCTTACGGGCCGGGGGTCACCGCCCGGCCTTCGGGTCACGACGCGGTTCGATGCCTGGCGAACCTGGCCCTGTTGTGTGGAAAGGTCGGCATCGAAGGCGGGGGGGTGAATCCACTCCGGGTCCTCGGCAACGAACAGGGGACCGTCGATATGGGCGCTCACCCTTCGTTTCTGCCCGGCTATCAGCCGGTGAGTTCCCGGGGGGTGCGCGAGAAATTCGCCGAGGCCTGGGGCGTTGGGGAGCTTCCGGACCGGCCGGGGCTCTCGATGGAGGAAATCCTCGAGGCCGCCGCCCGAAAGGAGATCCGCGCGCTCTACATCCTGGGGACAAACCCCATGCGAAACGCCCCGGCGGGCGGTGTCGTCGAACGGGCGCTCAACAACGTCGAGTTCCTGGTTGTGCATGACATTTTCCTCACCGAAACGGCCCAGCTCGCCGACATGGTGCTGCCAGCGGCCTGTTTCGCCGAAAAGAACGGGACCTTCACCAACACCGAGCGGCGCGTCCAACGGGTGCGGAAGGTGCTCGAGCCGCCCGATCAGGCCAAGAGCGAATGGCGGATCATCGCGGCCCTGTCCCGGCTTATGGGACTCACCATGGACTATCGGACCCCTTCGGACATCTTCGATGAAATGGCGCGGCTCACGCCGCTTTACGGTGGGATGAACTATTGGAGGATCGAGCAGAACGGGCTCCAGTGGCCCTGCCCGTCACCGGACCACCCGGGGACACGCGTGCTGCACCGCGAGGAGTTTCCTTGCGGCAAGGGACGATTTCACGCCGTGGACTGGATGATCCGGAAAGGCCGCTAA
PROTEIN sequence
Length: 787
MSNETITLTVHGKEGRPKTVRGKAGQTLLEIFRENGIRLPTLCHHPKMPPYGGCRLCIVEIEQVRGFPSSCSTTALDGMVVHTHSERVVAIRKTMLELLLAFGEHNCLLCERSGTCELQDLVYEHRIDTVRFRTSRPPRPLDDANSMIVRDPNKCVLCARCVRGCLDVQVNGAIDMSNRGVDTVISTFDGSPLGESNCRFCGECVSLCPTGALAFKEARFRGRPWELRAVATTCTHCGVGCQLELNVKDNKVVKVTTNPNIQGPNRGSLCVRGRFEFDFIHHPDRLKTALVRERGGFRQACWDETLDRLAGEFGRIRKEHGPDALAFVASPRCTNEENYLLAKFARAVIGTNNIGQIPRPGAGRCMVDGLADAFGFGAMTNPIEDFEKADVILIAGADASETHPVISSAFKRAARNGHTRLLVVDSNHTELADFARIRLRPKPGTDVMWMNGLAHVIIAEGLLDRAFVEDRTEGYEAFRRTVATYTPERVELQAGIPVEDLLAAARLYAGAARGSIAYGPGVTARPSGHDAVRCLANLALLCGKVGIEGGGVNPLRVLGNEQGTVDMGAHPSFLPGYQPVSSRGVREKFAEAWGVGELPDRPGLSMEEILEAAARKEIRALYILGTNPMRNAPAGGVVERALNNVEFLVVHDIFLTETAQLADMVLPAACFAEKNGTFTNTERRVQRVRKVLEPPDQAKSEWRIIAALSRLMGLTMDYRTPSDIFDEMARLTPLYGGMNYWRIEQNGLQWPCPSPDHPGTRVLHREEFPCGKGRFHAVDWMIRKGR*