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LAC_acetylene_scaffold_44435_4

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(1523..2272)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Desulfovibrio vulgaris RepID=A1V9R7_DESVV similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 1.60e-88
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 4.50e-89
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 2.20e-88

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Taxonomy

Desulfovibrio vulgaris → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
AGGATTGAACCCTGGAAGCTTCTCGAGGCCGGGCAACTGGCCTGGGGGGAGTTCGACGATCGCGCCCGGGACGCCATCGTCCGCCACTACGCGCCCAAAATCAAGATCCTCGGCCTGCGCCTCAAGGGCAAGCTGCCCCAGCAGGTGGAGCTCAACGAGTTGCTCTCGGCCGGGACCCTGGGCCTGGTGGAGGCCCTGGGCAAGTTCAACCCCAAGCTGGGCATCAAGTTCGAGACCTACGCCGAGAACCGCATCAAGGGGGCCATGCTCGACGAGCTCAGGCGCATGGACTGGTTCTCCCGCGGCCTGCGCCACCGGGTGCGCCAGTTGGAAGAGGCCATGACCCGCATTGAGCATCAGACCGGCCGACCGGCCACCAAGGCCGAGCTGGCCAAGGTCACCGGCCTGTCCGAGCGCGACGTGGAGGCCGGGCTGGGGGCGCTCCAGAACCAGTTGTGCCTGAACCTGGATACCATGCAGGAGTATTTCTCCCCGGAGTCCTCGCCCCTGCACGAGAACGAGCCCTACCGTTCGGCCGCACTCAACGACATCATTGACAAACTGGCCGATCTCATAGACGAATTGACCCACAGGGAAAAGCTGGTATTATCCCTGTACTACAGCGACGAGTTGAACATGCGCGAAACCGCCGAGGTCATGGGCATCACCGAAGGCCGGGTTTCGCAGCTTCACTCCCAGGCGCTGAAGAAACTCCGCGAGAAATTCCAGGCCTCGCACGGCCTGAGTTGA
PROTEIN sequence
Length: 250
RIEPWKLLEAGQLAWGEFDDRARDAIVRHYAPKIKILGLRLKGKLPQQVELNELLSAGTLGLVEALGKFNPKLGIKFETYAENRIKGAMLDELRRMDWFSRGLRHRVRQLEEAMTRIEHQTGRPATKAELAKVTGLSERDVEAGLGALQNQLCLNLDTMQEYFSPESSPLHENEPYRSAALNDIIDKLADLIDELTHREKLVLSLYYSDELNMRETAEVMGITEGRVSQLHSQALKKLREKFQASHGLS*