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LAC_acetylene_scaffold_63672_1

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 163..3759

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 1193.0
  • Bit_score: 1644
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNZ8_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 1193.0
  • Bit_score: 1644
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 1193.0
  • Bit_score: 1644
  • Evalue 0.0

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3597
ATGGATGTTGAAACGAGAAACAAACTCGATACGACTCCAAAGGAAGAGGGTCATGAGGCCACGCCCCGTGACGTCCGTTCCGAGGACCTGCTGAATCTTCTCAAGGGCGGGCGCCGTGCCGCGGACCTTCGCGGTGTTCAACCCTCCGCCCTGGCCTACCTGCTGGCGCGATCCCTTCGGACTGTCCGGCATCCCGTGCTTTGCATCGTTCCCACGGATCGCGAAGCCGAACGCTTCGCCGCCAATGTGGCGTTTTTCCTCGGCGAGGCGACGAACGGCCGGGGTTCCGGTTCCAAGCTGGATCGCCGCGTCTGGACCTTCCCGTCGCGCACGGCCCACAAAGCCCAGTCCCTTGGCAAGATGGAAACGACGGCCCGGCGTCTCGAAACCCTCTATGCCCTCAAGTCCGGCCCTTCCCCCGTGCTGGTGGTCACCTCGGCCCTCGCCCTCATGGAGCGCGTGGTGCCGCCCGACGTCTTCATGAAGGCGACGGAATACCTCGTCAAGGAGGAGACCGTCGACCTCGAGACTTTCGTCCGGACCCTCGCCGAACGCGGCTACTACCGGGTTTCCCTCGTCGAGGAATACGGGGACATGAGCGTCCGGGGTGGCGTGCTCGACATCTTCGCCCCTCTCTATCGCCATCCGCTGCGCCTCGAGTTCTACGGTGACGAAATCGAGTCCATCCGGCTCTTCCATTCCAGTTCCCAGAGGTCTCTCGAGGCTCTCGAGGACGTGATCCTCCTTCCGGGAAACGAGATCATTCTGGATGAGGCCGCCCGCGAACGCGCCCGAAAAGCCGTCTACGACGATGTGCGGAACGAACGGCTGAGCCCGTCCGCGGGAAACGTCTGGCTCGAGAAGATTCAGGAAGGGCACCAGCTCGGTGCCTTCGAGGCGGTCTTTTCCGTCTTTTACGATTCCATGACGACCCTCCGGGACTACCTGGATCCGAATACGATCGTGGTCTGGACGGACACCGCCCGCATCGGGAAGGAAATGGACGAGACCGCCTTCCGGCTGGCGGCGGACTGGGAGGAGAACCGGACCCCCAACGAGTGGCGCAGGCCCCCGTCGGAACTCTTTGAAGATCCCGCCGCGATTCGGGACGGGCTGGCGGCGTTCCAGAACCTTCGGGTCAATGCGCTCGTCGGCGACGACGAGTCCCGGGAAGTGCTCGACATGAGAACGGAGGGGCATGAGGCGCTGGCGCTTGCCGTGCGCTCGCACCCCAACAAGGAGCGGCTGCTCGAGCCCGTGGCCGGCCAGTTCCGGCGCTGGAGGGAGGAAGGCGTGCTGGGCTTCCTGGTCTGTCACCAGAAGGAGCAGGCACGGCGCATCGCCGAACTCCTCGAGGGCTACGGCATGGATGCCCTGTGGAGCGAGCGTCCGTTCGGGGAGGAGTCCTTCGAATCCGCCGCGGTGAAGGTGCTGGTGGGCGAACTGGACAAGGGCTTCGTCTGGCGGTCGGAGGGACTCGCCGTGGTCTCCGAAGAGGAGATTTTCGGGAGGAAGCGGCAGCGTCAGGCCAGGCGGTCCCTGTCGGGTCTCTTCCTGAGTTCCTTCCAGGATCTCCATGCCGGGGATTACATCGTCCACGTGGACCACGGCATCGGCGTCTACCGGCAGTTGACCCACCTCAACGTGCGGGGCGTCGGGGCGGACTTTCTCCTTCTCGAGTACCAGGACGGAGACAAGCTCTACGTCCCTGTGGACAAGCTCCAGAAGGTGCAGAAGTTCCTCGGGCTCGAGGGGCAGGAACCCAATGTGGACCGCCTCGGGGGCAAGTCCTGGGAGGCCGCCAAACGCAAGGCGCGTGAATCCGCCGAACGCATCGCCGAAGAATTGCTTCAGCTCTACGCGCACAGGCAGGTGGGCGAGGGGCACCGGTTTTCGGTCCCCGACAAATATTTTCAGGAGTTCGAGGCCACCTTCGCCTACGAGGAGACGCCCGATCAGGCCAGGGCCATCGAGGAAGTCATCGAGGACATGGCCTCGCCCCGCCCCATGGATCGCCTCATTTGCGGAGACGTGGGCTACGGCAAGACGGAGGTGGCGCTCCGGGCGGCCTTCAAAGCGGTGATGGACGGCAAGCAGGTGGCCATCCTGGTGCCGACCACCATCCTGGCCGAACAGCACTACCAGGCCTTCCTGGATCGCTTCGAGGGGTTTCCGGTGGTGGTGGCCTCGCTCAGCCGCTTCAAGACGGCGGCCCAGCAGAAACAGGTCGTCGACGGACTGGTGAAGGGTTCGGTGGATATCGTGGTGGGGACCCACCGGCTGCTCCAGAAAGACATCGCCTTTCGGGACCTCGGGCTCCTCATCATCGACGAGGAGCACCGGTTCGGTGTCAAGCACAAGGAGCGCATGAAGCAGATACGCGTTTCCGTGGACGTCCTGACCCTTACGGCCACCCCCATCCCCCGCACTCTGCACATGGCTCTCTCGGGCATCCGCGATCTCAGCACCATCGAGACCCCGCCCCAGGACCGACACGCCATCGAGACCACCGTCTGCAAGTACGACGAATTCACCATCCGCGAGGCGGTGTACCGGGAGTTGCGGCGCGGAGGGCAGGTCTTTTTCGTCCACAACCACGTGCAGAGCATCTACCAGATGGGCACGCTGCTTCAGAAGCTCGTGCCCGAGGCCCGCGTCGCGGTGGCTCACGGCCAGATGAAGGAGCGGGAGCTCGAGAAGGTCATGCTCGAGTTCATCAAACGCAAGGTGGACGTGCTGGTTTGCACCACCATCATCGAATCGGGTCTCGACATTCCGGCGGCCAACACCATCATCATCAACCGGGCGGACAAGTTCGGGCTGGCCCAGATCTACCAGCTCCGGGGCCGGGTGGGGCGGTCCAACGAGCAGGCCTTCGCCTACCTGCTCATCCCGGACGAACACCTCATCACCCGGGACGCCCAGAAGCGGCTGCGTGCCCTGCTGGATTTCAGCGAACTGGGGGCGGGGTTCAAGATCGCTCTCAATGATCTGCAGATCCGTGGGGGGGGCACCATTCTCGGTTCGGCCCAGTCGGGTCACATCGCGGCCGTGGGCTACGAACTCTACCTCGAACTCCTCGAGGGCACCATCCGGCGAATGAAGGGCGAGCAGGATTCGGCGGAAGCCGTGGACACGGAAGTCAACCTCTCCGTTCCGGCCTTCCTGCCCGAAGAGTTCATCCCGGACACGGACCAGAGACTCATGGCCTACAAGCGCCTGGCGACGGTTGCCACGGAGGTGGAAGTCGAGGACCTCGCCGGAGAGTGGCGGGACCGCTACGGCCCCTTCCCGGAGAGTGTGCGCAACCTGGTGCTGCTCGCCAAGGTGAGGCTCGTGCTCAAGCAGATGCGCGTCCTGCGGCTTGACGGCGACGAGGAAACCTTTACACTGCTCTTCGCCTCGGACGTGGACACGCGGCTCCTTCAGGCTCAGCTTGGAGCGTTGAAGTGTACCTTCACCACGGACGCTTCGGGCAAGCTCCGTATCGAGATTTGGGGGAAGAACGTGCAGCAAAGGCTGCTCAGGCTCAAAAGGATCTTGCAGGAGCCTGGTGAACGTGTTAATCAAGCCAAGTTAAATCAGTACGTTACATAG
PROTEIN sequence
Length: 1199
MDVETRNKLDTTPKEEGHEATPRDVRSEDLLNLLKGGRRAADLRGVQPSALAYLLARSLRTVRHPVLCIVPTDREAERFAANVAFFLGEATNGRGSGSKLDRRVWTFPSRTAHKAQSLGKMETTARRLETLYALKSGPSPVLVVTSALALMERVVPPDVFMKATEYLVKEETVDLETFVRTLAERGYYRVSLVEEYGDMSVRGGVLDIFAPLYRHPLRLEFYGDEIESIRLFHSSSQRSLEALEDVILLPGNEIILDEAARERARKAVYDDVRNERLSPSAGNVWLEKIQEGHQLGAFEAVFSVFYDSMTTLRDYLDPNTIVVWTDTARIGKEMDETAFRLAADWEENRTPNEWRRPPSELFEDPAAIRDGLAAFQNLRVNALVGDDESREVLDMRTEGHEALALAVRSHPNKERLLEPVAGQFRRWREEGVLGFLVCHQKEQARRIAELLEGYGMDALWSERPFGEESFESAAVKVLVGELDKGFVWRSEGLAVVSEEEIFGRKRQRQARRSLSGLFLSSFQDLHAGDYIVHVDHGIGVYRQLTHLNVRGVGADFLLLEYQDGDKLYVPVDKLQKVQKFLGLEGQEPNVDRLGGKSWEAAKRKARESAERIAEELLQLYAHRQVGEGHRFSVPDKYFQEFEATFAYEETPDQARAIEEVIEDMASPRPMDRLICGDVGYGKTEVALRAAFKAVMDGKQVAILVPTTILAEQHYQAFLDRFEGFPVVVASLSRFKTAAQQKQVVDGLVKGSVDIVVGTHRLLQKDIAFRDLGLLIIDEEHRFGVKHKERMKQIRVSVDVLTLTATPIPRTLHMALSGIRDLSTIETPPQDRHAIETTVCKYDEFTIREAVYRELRRGGQVFFVHNHVQSIYQMGTLLQKLVPEARVAVAHGQMKERELEKVMLEFIKRKVDVLVCTTIIESGLDIPAANTIIINRADKFGLAQIYQLRGRVGRSNEQAFAYLLIPDEHLITRDAQKRLRALLDFSELGAGFKIALNDLQIRGGGTILGSAQSGHIAAVGYELYLELLEGTIRRMKGEQDSAEAVDTEVNLSVPAFLPEEFIPDTDQRLMAYKRLATVATEVEVEDLAGEWRDRYGPFPESVRNLVLLAKVRLVLKQMRVLRLDGDEETFTLLFASDVDTRLLQAQLGALKCTFTTDASGKLRIEIWGKNVQQRLLRLKRILQEPGERVNQAKLNQYVT*