ggKbase home page

LAC_acetylene_scaffold_46752_4

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(1316..3355)

Top 3 Functional Annotations

Value Algorithm Source
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KJU82973.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 283.0
  • Bit_score: 308
  • Evalue 1.60e-80
Putative sensory protein id=1963028 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 372.0
  • Bit_score: 302
  • Evalue 8.10e-79
sensory protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 362.0
  • Bit_score: 289
  • Evalue 2.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Magnetobacterium bavaricum → Candidatus Magnetobacterium → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2040
ATGTCCATCAAATACAAATTTCTCGTTCTGACGCTCGTGCCGATCCTGTGTGTGACGCTGCTGGGCGCGGGACTGTCGATCTGGGTCAGCACCACCGAGCATGAAAAGCAGGCGCGCAGGGAGATGGCCGGGCACCTCGGGCAGCTCGCGGACGAACTGGACCGGTTCGGCGCCGATCTGCTGAAGGTGCTCGAGTCCACCGCGGGAGACCAGGAATTCAACACCACGGTGAGATCGCTGCATTCCCTCGGAGACGACGTTATGAAGCTCCGGCGCGATGTGACGTGCCAGGTGATGAGGTTTCTCGAGCGGCGCCTCGGCCCCACTCGTGGCGACGCCGCGGCGTTGTACGATGCGGGCGGACTGTTGGGTTTCGCGTTTCCGGGCCAGTACGGTGTCCGCGCGGGGGGCCGGGCCGGGGAGCGGCCGGTCCTGCTTGTCCCCACGGCCGATTCCGACCTCCTGGACTGCACGTCGAAAAACTGGAAAGAAGCGGAGATGCCGGAGGTCTTTTCGACTTCCATGGACGCGCCCGAAAGGCCCTCCGTGCGCCTGGCGGTCCGGCGCCGGGTGGTCGTGGCCGAAGGGGTGGCTCCCGTGAAGCACGTGACTTTTTCCATGAGCACGTTCAAGGAAGAGGAGAGCGTCATCGGCGCCCTCATGCTTCGGAGGAAGGTTTTGCCGGAGTTTGTGAAGGAGATCGCCCGGCAGGCCGCAAAGGACCTCTATGTCTTCTCTCCCGAGGGGGACCTGGTGCTGGCGAGCGGTCCCTTCGCCATGGAAGGGGGGCTCGATTTCATAGGGCGGGCGAGGGATGCCGAAGTGCTGGTCGAACGCACCTTCGGAGGCGAACCCTGCACTTTGATGCTGAGGCCCTACCGGCAGGGGGGGGAAACGGTGGCCATCCTGGCCTCGCGTGTGTCGCGGGGGGTGGTCGAACGGGAAATCTCCCGGACGGTATGGCTGCACATGGGCGGGCTGGCCCTGGGGCTCGTGGTGGCCGTGGCGATGGCTTTCGGGTCGGGGCGGTTCATCTCGAAGCCTCTGGCCCGGATTTCGGGCGAGATGAAGGAAATTGCACGGACACGGGACCTGGACCGGCGCGTCACGGTACGTTCCGGGGATGAAATCGGGGAGCTTTCCATCTCGTTCAACGACATGGTGCGCCAGCTCAAGGACGCCTCCGAGGCCGTCGAGGCCTACAGGGAGCACCTCGAGGAACTGGTGGCCCGGAGGACCGGGCAGCTTCAGGAGAAGATGGCCGAACTCGAGTCAGCCAACCGGCGGGTCGTCGAGAGCATCCAGTACGCCCGCACCATTCAGAAGGCCATCCTGCCGACGGAACAGAACATCGCCTCGAGGGTGCCCGATCACTTCGTCATCTGGCATCCCAAGGACGTCATCGGCGGCGATATCTTCTGGTTCAACGGGGAAGACCGGGGCTTTCTGTTCGCCGTCATCGACTGCACGGGTCATGGAGTGCCCGGGGCCGTCATGACCATGATCGCCTCGACCACCCTCAACCGGGTGGTCCACGAAGTGGGGGTTACGGACCCGGCCCGCATCCTCGAGGGGCTCAATCGCCTGGTGCGCGGCACACTCAGCAGGGATTCCGGGGAACCCTTCTCGGACGACGGACTGGACATCGGACTTTGCTTCATCGATGCCACCCGCACGTTTCTGACCTTTGCCGGGGCGCGGATCTCGCTCTTCCATACGCGCGGGGGCGAAGTGCTCGAGTTGAGAGGAGACCGCCACAGCGTGGGCTACGCCTCTTCGGATCCGGACCATGTGTTCACCAATCGCACCATCGCCGTCGATCCCTCCATGAATTTCTACATGGCGACGGACGGCATTCAGGACCAGGTGGGAGGCGACAAACACCTGCCGTTCGGGAAACGCCGCTTCAAGCGGCTGCTGACCGAGCACCACGGGAAGCCCTTCATGCTCCAGCGCGAACTCCTGTTGCGGGCGTTCGGGGAGTACAAGGGGGATGAAGTGCAGCGGGACGACGTCACCGTGGTGGGTTTCACCGTTTAG
PROTEIN sequence
Length: 680
MSIKYKFLVLTLVPILCVTLLGAGLSIWVSTTEHEKQARREMAGHLGQLADELDRFGADLLKVLESTAGDQEFNTTVRSLHSLGDDVMKLRRDVTCQVMRFLERRLGPTRGDAAALYDAGGLLGFAFPGQYGVRAGGRAGERPVLLVPTADSDLLDCTSKNWKEAEMPEVFSTSMDAPERPSVRLAVRRRVVVAEGVAPVKHVTFSMSTFKEEESVIGALMLRRKVLPEFVKEIARQAAKDLYVFSPEGDLVLASGPFAMEGGLDFIGRARDAEVLVERTFGGEPCTLMLRPYRQGGETVAILASRVSRGVVEREISRTVWLHMGGLALGLVVAVAMAFGSGRFISKPLARISGEMKEIARTRDLDRRVTVRSGDEIGELSISFNDMVRQLKDASEAVEAYREHLEELVARRTGQLQEKMAELESANRRVVESIQYARTIQKAILPTEQNIASRVPDHFVIWHPKDVIGGDIFWFNGEDRGFLFAVIDCTGHGVPGAVMTMIASTTLNRVVHEVGVTDPARILEGLNRLVRGTLSRDSGEPFSDDGLDIGLCFIDATRTFLTFAGARISLFHTRGGEVLELRGDRHSVGYASSDPDHVFTNRTIAVDPSMNFYMATDGIQDQVGGDKHLPFGKRRFKRLLTEHHGKPFMLQRELLLRAFGEYKGDEVQRDDVTVVGFTV*