ggKbase home page

LAC_acetylene_scaffold_24404_57

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: comp(62983..63282)

Top 3 Functional Annotations

Value Algorithm Source
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 94.0
  • Bit_score: 107
  • Evalue 1.60e-21
Histone family protein DNA-binding protein id=3787644 bin=GWC2_Deltaproteobacteria_55_46 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 94.0
  • Bit_score: 107
  • Evalue 5.60e-21
Tax=GWA2_Deltaproteobacteria_55_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 94.0
  • Bit_score: 108
  • Evalue 4.60e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Deltaproteobacteria_55_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCCATCGACAGGAAAGCCCCTCACGAAAGTCGAAATTATCAATGCGCTCGCAAAGAAAACCGGGTTCACAAAGAAAGATGTCGGCCTGGTGCTGGATGAGCTCGCAAAGCTCTCCTACAGCGAAGTGAAGAAAAGCAAAAAATTCACGCTGCCTGGCATCGCCATCATGAAGGTTGTCAAAAGAAAAGCAAAAGTCGGACGCAATCCGGCGACTGGCCAGCAGATCACTATTCCTGCTCGCGATGTCATCAAAATCAGTGTCGCCAAACCCTGCAAGGATGCAGTGCTCGGAAAATAA
PROTEIN sequence
Length: 100
MPSTGKPLTKVEIINALAKKTGFTKKDVGLVLDELAKLSYSEVKKSKKFTLPGIAIMKVVKRKAKVGRNPATGQQITIPARDVIKISVAKPCKDAVLGK*