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LAC_acetylene_scaffold_9768_5

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 5415..6098

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein id=2545608 bin=GWB1_Spirochaetes_59_5 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 144
  • Evalue 1.20e-31
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 177.0
  • Bit_score: 105
  • Evalue 1.40e-20
Tax=GWC1_Treponema_61_84_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 180.0
  • Bit_score: 188
  • Evalue 8.00e-45

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Taxonomy

GWC1_Treponema_61_84_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 684
ATGGAGAAAGAGGCAGCGAGCTCTGTGCAGTCTACGATAAGCAAGGCAAAAGCCAATCAAGGGAGCTTCGACGAAAAAGCCGTAATCGAGGAAATACTTGCAGGAAACTCGAATGCCTATCGCCGGATTGTCGAAAAATACAGCGCGCGCGTCCTGGCATTTTGCCGATCGCGAATGCGCTCGGAAGAAGATGCTCGCGATGCGGCGCAGGAAGTCTTTATTCGCGCCTATGCATCGCTTGCTTCTTTTCGGAGCAATGAAAATTTCGCTTCGTGGCTGTTTGCAATCGCCGCAAACAATGTGCGGACGCACTTCAGGCTTTTTTCATCCAGGAAACATAAAGAAGAGGCCTTTGCAAAAGAGATCGCCGTCGCACCGATTCCGGATCCCGCAGAAGAGGCCGAGCAAAACCTTCGCGCCGAAGCGCTCAGGCAGACTGTTGCATCCTTGCCGCTCGATTTGAGAAAGCCTGTGGAGCTGTACTATTTTGCCGAGCTTTCCGTGGAGGAAACGGCGAGTGTTCTGAAGCTTGGGCAAGAAGCGGTAAAGTCGAGATTGTTCCGGGCGCGCAAGGCCTTGCGGCAAGCAATTGAAAAAAGCAAAGCTTCATCGCATCTATTCGCTGAACCAGAACCCGCAGCACATCAACGCGCCGATCATGTGCAACCAAAACAGTCTTCATGA
PROTEIN sequence
Length: 228
MEKEAASSVQSTISKAKANQGSFDEKAVIEEILAGNSNAYRRIVEKYSARVLAFCRSRMRSEEDARDAAQEVFIRAYASLASFRSNENFASWLFAIAANNVRTHFRLFSSRKHKEEAFAKEIAVAPIPDPAEEAEQNLRAEALRQTVASLPLDLRKPVELYYFAELSVEETASVLKLGQEAVKSRLFRARKALRQAIEKSKASSHLFAEPEPAAHQRADHVQPKQSS*