ggKbase home page

LAC_acetylene_scaffold_22646_8

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 5475..5834

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1Z5_SPICH similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 174
  • Evalue 3.40e-41
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 174
  • Evalue 9.70e-42
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 174
  • Evalue 4.80e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Treponema caldarium → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCCAGAGCAGTAGACGGAACCAGAAGAAAAGATCACCGCAAAAAAATACTCAAACATGCCGAAGGCTTTTGGGGCCGCAGGCATTCCAACTATAAAGTCGCAAAGGATGCGGTTGCTAAGGCACTTTCGGATGCATACAAAGACAGGCGTGATAAAAAGGGCGTGTTCAGAAGACTCTGGATCGCTCGTATCAACGCGGCGTGTCGTATGAGAGATATCAGCTACAGCCGGTTTATTGAGGGCCTGTACAAAGCTGATGTATGCATTGACAGGAAAATGCTCGCCGATATCGCTGTACGCGATCCGGCAGCATTCGACGCAGTTGTGGAGAAGGCAAAAGCAGCCCTCCAGGGGTAA
PROTEIN sequence
Length: 120
MPRAVDGTRRKDHRKKILKHAEGFWGRRHSNYKVAKDAVAKALSDAYKDRRDKKGVFRRLWIARINAACRMRDISYSRFIEGLYKADVCIDRKMLADIAVRDPAAFDAVVEKAKAALQG*