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LAC_acetylene_scaffold_21762_1

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: 44..640

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3016548 bin=GWF1_Spirochaetes_60_12 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 182.0
  • Bit_score: 188
  • Evalue 6.50e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 185.0
  • Bit_score: 181
  • Evalue 1.30e-43
Tax=GWB1_Spirochaetes_59_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 186.0
  • Bit_score: 183
  • Evalue 1.70e-43

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Taxonomy

GWB1_Spirochaetes_59_5_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 597
TTGTTATCTTCTGGTGAGCAACAAAACGACTTCGATTTTCGCTCGATCTACGACTCGAACGTCGATATGCTGCTCAGGATAGCCTTCAGGATAACCAATTCCGCGGAGGCGGCAGAGGATGTGGTGCATGATGCCTTCGGCAAGCTCGTCGAGAAGGCCATGGTGTTCCCCACGAGAAACGACGCCAAGTACTGGCTCATCCGCGTGGTGAAGAACGGGGCCATCAACTACGCCAAGCGGAAGGGAAGGGAAACCAGGGCCTATGAGAAGTGGTGGAGGAGCGAGGCCTCTCCGATCGAGGACACCGAAGCCGGATCGCTTTCGATCAAGGAAACCGGCACTGAAGCCGGGATCCAGCCCTCCGTCGAGGAAGATGTCCTGAGGAAGGAATCGGCCGAGGAGATCAAGCGTCTTCTCGACAGCCTCCCTGAAAAACTGAAGATGGTGCTCATACTCAAGGAATATGGCGGGATGAATTACAGGGAGATAGGAAAAATTCTGGGAATAAGCGAGGGCAACGTCAAGGTGCGCGCATTCCGTGCCAGGGAAGCCCTTCTCGCGCGGATGGGCAGGGAGGATGTTCATGTGTCCAGATGA
PROTEIN sequence
Length: 199
LLSSGEQQNDFDFRSIYDSNVDMLLRIAFRITNSAEAAEDVVHDAFGKLVEKAMVFPTRNDAKYWLIRVVKNGAINYAKRKGRETRAYEKWWRSEASPIEDTEAGSLSIKETGTEAGIQPSVEEDVLRKESAEEIKRLLDSLPEKLKMVLILKEYGGMNYREIGKILGISEGNVKVRAFRAREALLARMGREDVHVSR*