ggKbase home page

LAC_acetylene_scaffold_56817_4

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(2846..3187)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HBbu id=3931369 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 107.0
  • Bit_score: 129
  • Evalue 1.20e-27
hbbU; DNA-binding protein HbbU similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 101.0
  • Bit_score: 123
  • Evalue 2.40e-26
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 141
  • Evalue 5.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC1_FULL_Spirochaetes_54_7_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCTGAAAAACTTACCAAGGCCGAATTGATCGATGCGCTGTATGCGACGCTTTCTTCTTCGAGCAAGACGACGCGGAAAGAAATTCATGAACTCATCGATGGGCTTTTTTCGGAGATAAAGGGAGCCATTCTCAGCGGCAAGACCGTTGAACTGCGTGGCTTCGGCACTTTCGAGGTCAAGCTTCGAAAGGGCAGGACAAAGGCGCGCAATCCGAAGACCGGAGAGATCGTATCGGTTCAGGATCATGGCGTGGCGGGGTTCAGGCCGGGGCGCGAGCTCAAGAAATCGGCCTGGGAGATGGAATCCTCGAAAATCTCCAGGACCTTCAAGAAATCCTGA
PROTEIN sequence
Length: 114
MAEKLTKAELIDALYATLSSSSKTTRKEIHELIDGLFSEIKGAILSGKTVELRGFGTFEVKLRKGRTKARNPKTGEIVSVQDHGVAGFRPGRELKKSAWEMESSKISRTFKKS*