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LAC_acetylene_scaffold_47241_3

Organism: LAC_acetylene_BJP_IG2103_Bacteroidetes_37_22_48_12

partial RP 26 / 55 BSCG 31 / 51 ASCG 11 / 38 MC: 1
Location: comp(1967..2590)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2183571 bin=GWE2_Bacteroidetes_32_14 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 191
  • Evalue 8.00e-46
RNA polymerase sigma factor SigZ similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 178.0
  • Bit_score: 159
  • Evalue 7.30e-37
Tax=BJP_IG2103_Bacteroidetes_41_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 181.0
  • Bit_score: 229
  • Evalue 2.20e-57

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Taxonomy

BJP_IG2103_Bacteroidetes_41_9 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 624
ATGATGAAGGCTGAAAAGAAAACACAAGCCGGAAAGGACGGTAGTGAGCACGCAAATCCACAACAGGTGAATTCGCAGGTAGAAGCTCTTTGGTTTGGCCTGAGCCAAAAGCTGAAGCAATTTATTCTCAGCCGCGTTGGCGATGAAATGGTGGCCGACGACCTGCTTCAGGAAGTGTTTATCAAGGTGCACACCCATATTGACAGCCTGAACGATCGCACAAAGATCCAGTCGTGGATGTATCAGATCACGCGCAACCTGATAAGCGACTACTTCCGGAGCCAGCACAAAGGCCTCAACACAGAAAATACACTTCCTGATGAAGATGAGGTGGACGCCAGTGAGTTTATGTCGGAAGCCTTGCAGGACATGGCCAAAATGATGTCGGCGCTCCCTGAGGCCTACTGCGAAGCCCTTTGTTTGACCGAGTTGCAGGGCATGAGTCAGAAAATGTATGCCGAAAAAACCGGAATATCCTATTCGGGAGCCAAATCGAGGGTGCAGCGTGCACGTGTCATGCTCCGCGACATGCTGATGAACTGCTGTCATTATCAGTTCGACCACTATGGTTCCATCATCGACATCAGGCCTGTTCGCTGCTGTTGCTGCAACAGCCATACCTGA
PROTEIN sequence
Length: 208
MMKAEKKTQAGKDGSEHANPQQVNSQVEALWFGLSQKLKQFILSRVGDEMVADDLLQEVFIKVHTHIDSLNDRTKIQSWMYQITRNLISDYFRSQHKGLNTENTLPDEDEVDASEFMSEALQDMAKMMSALPEAYCEALCLTELQGMSQKMYAEKTGISYSGAKSRVQRARVMLRDMLMNCCHYQFDHYGSIIDIRPVRCCCCNSHT*