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LAC_acetylene_Desulfovibrio_69_12

In projects: LAC_acetylene  |  LAC_acetylene_final

Consensus taxonomy: Desulfovibrio  →  Desulfovibrionales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: LAC_acetylene_UNK

Properties

Avg. coverage: 11.76 Longest contig: 12.14 Kbp Bin length: 1.62 Mbp GC content: 68.98 %
Contigs count: 528 Features count: 1843 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 36 / 55 BSCG 40 / 51 ASCG 10 / 38

Description

LAC_acetylene_Desulfovibrio_related_68_12

Displaying items 351-400 of 528 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
LAC_acetylene_scaffold_48408
Species: Desulfovibrio alkalitolerans (100%)
2 1026 bp 73.78 13.30 100.29
LAC_acetylene_scaffold_60622
Species: Desulfohalobium retbaense (50%)
2 2171 bp 71.81 12.85 95.07
LAC_acetylene_scaffold_60056
Species: Desulfovibrio desulfuricans (50%)
2 2191 bp 71.66 11.36 93.38
LAC_acetylene_scaffold_13958
Species: Desulfovibrio magneticus (50%)
2 1312 bp 70.20 11.09 91.23
LAC_acetylene_scaffold_20055
Species: Desulfovibrio sp. X2 (50%)
2 2288 bp 70.24 11.41 95.32
LAC_acetylene_scaffold_61718
Species: Desulfovibrio sp. U5L (50%)
2 2695 bp 73.36 10.02 98.07
LAC_acetylene_scaffold_17044
Species: Desulfovibrio alaskensis (50%)
2 1913 bp 73.13 10.19 90.33
LAC_acetylene_scaffold_14993
Species: Desulfovibrio africanus (50%)
2 1493 bp 70.46 9.24 93.44
LAC_acetylene_scaffold_41546
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 2388 bp 74.71 8.92 100.75
LAC_acetylene_scaffold_59119
Species: Desulfovibrio alaskensis (50%)
2 1819 bp 68.17 9.24 86.09
LAC_acetylene_scaffold_39086
Species: Desulfovibrio fructosivorans (50%)
2 1156 bp 71.71 9.60 99.91
LAC_acetylene_scaffold_56954
Species: Desulfovibrio africanus (100%)
2 1465 bp 73.99 11.47 92.76
LAC_acetylene_scaffold_33073
Species: Desulfovibrio sp. X2 (50%)
2 3943 bp 69.67 13.24 98.30
LAC_acetylene_scaffold_20866
Species: Desulfovibrio sp. FW1012B (50%)
2 3157 bp 68.45 9.98 99.78
LAC_acetylene_scaffold_55003
Species: Desulfovibrio vulgaris (50%)
2 1074 bp 68.90 10.06 98.60
LAC_acetylene_scaffold_56117
Species: BJP_08E140C01_Desulfomicrobium_58_14 (50%)
2 1809 bp 70.76 13.27 98.18
LAC_acetylene_scaffold_6475
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 2270 bp 71.19 10.70 98.59
LAC_acetylene_scaffold_24550
Species: Desulfomicrobium baculatum (50%)
2 2326 bp 71.07 9.42 96.22
LAC_acetylene_scaffold_4369
Species: Desulfovibrio sp. A2 (50%)
2 1310 bp 72.90 10.19 98.93
LAC_acetylene_scaffold_60185
Species: Desulfovibrio desulfuricans (50%)
2 2108 bp 72.01 9.39 94.92
LAC_acetylene_scaffold_32215
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 3835 bp 69.47 13.38 99.50
LAC_acetylene_scaffold_60200
Species: Desulfovibrio gigas (50%)
2 2451 bp 68.18 14.50 99.51
LAC_acetylene_scaffold_38272
Species: Desulfovibrio sp. X2 (50%)
2 1460 bp 72.12 8.63 95.34
LAC_acetylene_scaffold_27949
Species: Desulfovibrio alaskensis (50%)
2 1753 bp 69.02 10.78 79.58
LAC_acetylene_scaffold_51658
Species: Desulfovibrio alkalitolerans (50%)
2 1284 bp 73.21 9.35 91.59
LAC_acetylene_scaffold_1881
Species: Desulfovibrio sp. 6_1_46AFAA (50%)
2 2465 bp 70.14 12.41 99.19
LAC_acetylene_scaffold_48610
Species: BJP_08E140C01_Desulfomicrobium_58_14 (50%)
2 2879 bp 69.43 13.44 96.39
LAC_acetylene_scaffold_48615
Species: Desulfovibrio hydrothermalis (50%)
2 1227 bp 69.52 12.96 99.76
LAC_acetylene_scaffold_30021
Species: Desulfovibrio desulfuricans (100%)
2 1367 bp 71.40 8.78 78.35
LAC_acetylene_scaffold_38288
Species: Desulfovibrio sp. X2 (50%)
2 1488 bp 68.21 12.10 74.80
LAC_acetylene_scaffold_4010
Species: Desulfovibrio salexigens (50%)
2 1238 bp 70.19 11.51 80.94
LAC_acetylene_scaffold_33230
Species: Desulfovibrio piezophilus (50%)
2 2908 bp 68.16 10.94 98.52
LAC_acetylene_scaffold_28003
Species: Desulfovibrio vulgaris (50%)
2 1292 bp 69.89 16.95 100.08
LAC_acetylene_scaffold_5517
Species: Desulfovibrio aespoeensis (50%)
2 2811 bp 71.33 8.70 89.86
LAC_acetylene_scaffold_49712
Species: Desulfovibrio aespoeensis (50%)
2 1188 bp 73.06 10.61 100.00
LAC_acetylene_scaffold_5540
Species: Desulfovibrio sp. TomC (50%)
2 1345 bp 67.96 10.26 65.58
LAC_acetylene_scaffold_45962
Species: Desulfovibrio sp. X2 (50%)
2 1988 bp 70.32 9.36 91.60
LAC_acetylene_scaffold_21038
Species: Desulfovibrio sp. X2 (50%)
2 1955 bp 72.99 12.20 100.51
LAC_acetylene_scaffold_39275
Species: Desulfovibrio alaskensis (50%)
2 1408 bp 70.81 8.95 91.19
LAC_acetylene_scaffold_28046
Species: Desulfovibrio aespoeensis (100%)
2 1030 bp 71.07 11.50 99.61
LAC_acetylene_scaffold_43795
Species: Desulfovibrio gigas (50%)
2 1680 bp 72.32 10.36 90.00
LAC_acetylene_scaffold_65446
Species: Desulfovibrio magneticus (50%)
2 1496 bp 71.12 10.43 99.26
LAC_acetylene_scaffold_11921
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 1151 bp 70.81 9.38 100.35
LAC_acetylene_scaffold_12179
Species: Desulfovibrio africanus (50%)
2 1720 bp 69.13 12.73 89.48
LAC_acetylene_scaffold_47089
Species: Desulfovibrio sp. FW1012B (50%)
2 1199 bp 67.56 14.51 100.08
LAC_acetylene_scaffold_17316
Species: Desulfovibrio piezophilus (50%)
2 2913 bp 69.07 13.23 98.76
LAC_acetylene_scaffold_48710
Species: Desulfovibrio magneticus (50%)
2 2266 bp 68.23 13.24 100.09
LAC_acetylene_scaffold_57249
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 1017 bp 72.37 9.14 92.04
LAC_acetylene_scaffold_65474
Species: Desulfovibrio desulfuricans (50%)
2 2258 bp 68.38 9.70 95.39
LAC_acetylene_scaffold_52125
Species: Desulfovibrio desulfuricans (50%)
2 1393 bp 70.78 14.86 91.10
Displaying items 351-400 of 528 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.