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LAC_acetylene_scaffold_50872_2

Organism: LAC_acetylene_Thermosinus_carboxydivorans_51_32

partial RP 26 / 55 BSCG 30 / 51 MC: 1 ASCG 12 / 38
Location: 2032..3807

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Acetonema longum DSM 6540 RepID=F7NKY8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 619.0
  • Bit_score: 487
  • Evalue 1.50e-134
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 619.0
  • Bit_score: 487
  • Evalue 2.20e-134
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 364.0
  • Bit_score: 448
  • Evalue 2.90e-123

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Taxonomy

Acetonema longum → Acetonema → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1776
ATGATCGACAAAAAGAAACTCATCGCGGATCGCGTAGATGAGTTGGTAAAGAAGGCATCGCAGGCAAACAACAGCATTGCAAGTGTGGAGATCATGGATACTTTCCAGAATGAGGATCTTTCACCGGAAGACATCGAAGATGTTTATGAGCTGTTGGCCAAAAAAAGCATAGAGATTGTCGATGAGCTTCCGGATCCTGATGCAATTGACGTTGCGATTTCCAGTGATGCCGAACCGGTAGTGGAAGAAGTGGATCTTGAACAATCGATTCCTGAAGGGGTCAGTATTGATGACCCTGTTCGGATGTATCTGAAAGAAATTGGCCGTGTTTCATTGCTGTCCGCCGTTGATGAAACGAAACTGGCCCGACGCATGGACAAAGGTAATGAAGCACAGCGGTTGCTGGATGATATAGTCGCTGAGAAATTTTTGGCAGTTCCTGGCGGTATGGCGCCGGATGAATGTATAAATTTGGCAAGGAATTTACTGGCGCCGGAAGAATATATGACACAGGTCCGGCAAACGAGTGAAGTGTTTAGAATTCTTCGCGACACCGCATCACTTGCGTCCAAAAAGATTGCAAACCGACTGTTTCAGGCAGCGGTCGCTGAATTGACCCGTGAAGAGACTCGTTCTTTGCAGAACCATCTGAGTTCAGAAGGAATTGAAATTATTGACGGTGACTTCTCACCAGGATTATTTGACCCACCTGCGACGGATGGAATCCCGACCCTGGCGCTTCCCGCATCTGCGGAAAACGACGAAGTGGTCCGTGTTTTGATTGAACTGGGGCAACTTCAATCCAATGTAGTCACCACCGAACAGCTAAACCATGCGCTACGACCCGAGGATCCACCTACTGTCCGTGTTTCGGAAAACAGTAACATTTCAAAAGTTGTACAGGGTTTGGATAGTGTAAATATTCGACTGATTGATGGCGGTAATCTTGCTTTGGCATATTTTTTACTGCAGGGTATTTCACAGCCATCGCCGGAAGTAAGCGAGTTGTTGCTCCGAATCCATGCTACGGCTAAAATTGCGCTGGAACAGGGAGATCGGGCTAAAAGGAGCTTGTCTGAGGCTAACTTGCGCTTGGTGGTCAGCATTGCCAAACGCTATGTCGGCAGGGGAATGTTGTTTCTTGACTTGATTCAGGAAGGAAACTTGGGCTTGATTAAAGCCGTTGAAAAGTTTGATTATACCAAAGGCTATAAATTCAGTACGTATGCAACCTGGTGGATTCGTCAGGCGATCACCCGTGCGATTGCGGATCAGGCGCGAACGATTCGAATTCCGGTGCACATGGTGGAGACCATTAATAAACTGATTCGAGTTTCTCGGCAATTGTTGCAGGAACTTGGGCGGGAACCGGCGCCTGATGAAATAGCCAAGATGATGGATATCACAGTGGAACGGGTTCGGGAAATCATGAAGATTGCTCAGGAACCAGTATCACTGGAAACGCCGATCGGTGAAGAGGAAGATTCCCATTTGGGAGATTTCATTGAAGACGCAGACGCTCAGGCGCCTGCGGATGCCGCCTCCTTTATGGTGCTCAAGGAACAGTTGGAAGAAGTGTTGGAAACCCTGACGCCACGCGAGAAAAAGGTATTGCGCCTGCGGTTCGGTCTTGATGATGGGAGGGCTCGAACATTGGAGGAAGTGGGACATTATTTTCAAGTCACCCGTGAACGGATCCGCCAAATCGAAGCGAAAGCGTTGCGGAAACTGAGACATCCCAGCCGTAGTAAAAAACTCAAAGATTTCTTGGAGTAA
PROTEIN sequence
Length: 592
MIDKKKLIADRVDELVKKASQANNSIASVEIMDTFQNEDLSPEDIEDVYELLAKKSIEIVDELPDPDAIDVAISSDAEPVVEEVDLEQSIPEGVSIDDPVRMYLKEIGRVSLLSAVDETKLARRMDKGNEAQRLLDDIVAEKFLAVPGGMAPDECINLARNLLAPEEYMTQVRQTSEVFRILRDTASLASKKIANRLFQAAVAELTREETRSLQNHLSSEGIEIIDGDFSPGLFDPPATDGIPTLALPASAENDEVVRVLIELGQLQSNVVTTEQLNHALRPEDPPTVRVSENSNISKVVQGLDSVNIRLIDGGNLALAYFLLQGISQPSPEVSELLLRIHATAKIALEQGDRAKRSLSEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPAPDEIAKMMDITVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDADAQAPADAASFMVLKEQLEEVLETLTPREKKVLRLRFGLDDGRARTLEEVGHYFQVTRERIRQIEAKALRKLRHPSRSKKLKDFLE*