ggKbase home page

anamox4_curated_scaffold_651_2

Organism: anamox4_Candidatus_Nitrospira_defluvii_60_9_curated

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 781..1833

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 349.0
  • Bit_score: 589
  • Evalue 6.30e-166
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082, ECO:0000313|EMBL:CBK40302.1}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 349.0
  • Bit_score: 589
  • Evalue 3.10e-165
tRNA pseudouridine synthase D Tax=Candidatus Nitrospira defluvii RepID=D8PAP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 349.0
  • Bit_score: 589
  • Evalue 2.20e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1053
ATGACCACCTCCTCCGCACTCGATGAGACGTTACCCTATCTGACCGCAGCAGTTCCGGCGCTCGGAGGACGCATTCGCAGCTCGCCGGAAGATTTTCAAGTCGAAGAACGGCCCCTCTACCTGCCCTGCGGCGAAGGGGAGCACCTCTATATCCGCGTGACGAAACGCGGCCTTTCCACGCCGGATCTGGTGTTGAGGTTGTCGTCCCACCTTCACGTCAAGGCGATGTCCATCGGAATTGCCGGGCTGAAAGATGCCCAGGCGGTCACGACTCAAATGGTGTCGCTGCAGGGAGTGAAGCCGGAGACGGTGGCAGCCTTAGCCACCGACGACCGTCTCCTGAAGGTGGAAGTCCTGGGCCGGCACCGCAACCGCTTACGCAAGGGGCACCATGCCGGGAATCAGTTTCGTCTGGTGGTGCGGGACGTTCGCGAGGGATGTGATGCCGATGTAGAGCAGATCTTCGAGCAGCTGCAACGCCGAGGGGTGCCGAATTATTTCGGGCCGCAGCGTCAGGGACGGGCGGGAAATAATTTTGCGGTTGGGGCTGAGTTGCTGCGGGACGCCGCCCGCCGAAACAAGATGAGCCGCGCCAAGCGACTCTGGTTCATGAATGCCTACCAGTCGCATCTGTTCAACCGGATCGTGGCGAAGCGAATCGACAGCCTCGACCGGGTTTTCGCCGGAGACTGGGCCATGAAGACGGACAATGGCGCCTGTTTTGTCGTCGAGCTGCCCGAGGTGGAACAGCCTCGCGTCGATCGATTCGAGATCAGCCCCACGGGACCGCTCTTCGGATCGCGTGCGCCTTGGTCGACGGGAACACCCGGCGAGCTCGAACGGTCGGTCGTGGCCGAGTTGGGCACCACGCCCGAGGCACTATCGAAGGCGGGCGCCGAGTGCGGATTCCGCGGGGAACGCCGGGCGCTTCGGGTGCGTCTCAATGACCTGAATTGGTCCCTCGAAGGCTCCGCCCTCACCCTCTCCTTCTGGCTGCCTCCCGGCTCCTACGCGACGAGCGTGCTGCGGGAGATCATCAAAACGGCTGCGTGA
PROTEIN sequence
Length: 351
MTTSSALDETLPYLTAAVPALGGRIRSSPEDFQVEERPLYLPCGEGEHLYIRVTKRGLSTPDLVLRLSSHLHVKAMSIGIAGLKDAQAVTTQMVSLQGVKPETVAALATDDRLLKVEVLGRHRNRLRKGHHAGNQFRLVVRDVREGCDADVEQIFEQLQRRGVPNYFGPQRQGRAGNNFAVGAELLRDAARRNKMSRAKRLWFMNAYQSHLFNRIVAKRIDSLDRVFAGDWAMKTDNGACFVVELPEVEQPRVDRFEISPTGPLFGSRAPWSTGTPGELERSVVAELGTTPEALSKAGAECGFRGERRALRVRLNDLNWSLEGSALTLSFWLPPGSYATSVLREIIKTAA*