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anamox2_curated_scaffold_18806_3

Organism: anamox2_Bacteria_34_5_curated

partial RP 29 / 55 BSCG 29 / 51 ASCG 7 / 38
Location: comp(2009..2458)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 149.0
  • Bit_score: 200
  • Evalue 9.50e-49
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ34378.1}; Flags: Fragment;; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 149.0
  • Bit_score: 200
  • Evalue 1.30e-48
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 149.0
  • Bit_score: 163
  • Evalue 2.80e-38

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Taxonomy

GWA2_WS6_37_6 → WS6 → Bacteria

Sequences

DNA sequence
Length: 450
AAAGTTTCAAGTCAATTAGCAAGTAAGCTTGGCAGAAAGCCAACTCCAAAAGAGATTGCAGATGCAATGGATTTATCATTGCAAAAGGTTAATGAAATTATAAAAATAGCACAAAAGCCACAATCTTTAGAAGCTCCAATTGGTGATGAATCTGATGCAAGCAGTCTTAGCGACATTATTGCAGATGAATATACAGCTTCACCTCAAGAGCTTGCAACATGGTCTTATCTAAAAAAGCAGATTAATGAAATTCTTGGAAATCTATCTGATCGTGAAAGAAAAGTTTTAGAATTAAGATTTGGATTACGTGATGGAGTAGCTAGAACACTTGAGGAAGTTGGCCACGAATTCAATGTAACTCGAGAAAGAATTAGACAGATAGAAGCAAAAGCTCTAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTCTGCGAGATTATTTAAATTAA
PROTEIN sequence
Length: 150
KVSSQLASKLGRKPTPKEIADAMDLSLQKVNEIIKIAQKPQSLEAPIGDESDASSLSDIIADEYTASPQELATWSYLKKQINEILGNLSDRERKVLELRFGLRDGVARTLEEVGHEFNVTRERIRQIEAKALXXXXXXXXXXALRDYLN*