ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

anamox2_curated_scaffold_4249_10

Organism: anamox2_Bacteria_61_6_curated

near complete RP 40 / 55 BSCG 43 / 51 ASCG 10 / 38
Location: comp(7755..8408)

Top 3 Functional Annotations

Value Algorithm Source
ycdC1; TetR family transcriptional regulator bin=RBG_16_Aminicenantes_66_30 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 191.0
  • Bit_score: 141
  • Evalue 5.90e-31
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 227.0
  • Bit_score: 75
  • Evalue 1.90e-11
Tax=RBG_13_Aminicenantes_63_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 198.0
  • Bit_score: 151
  • Evalue 7.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Aminicenantes_63_10_curated → Aminicenantes → Bacteria

Sequences

DNA sequence
Length: 654
ATGTATCATATCGACATGGCCGCCATCGCATCGACGCGAACGAATCCCAAGCCCGAGACCCGAGAGGCGATTCTGGACGCCTGCGATCGGATCATGTCCCGCTACGGATTTCGCAAGATGACGATGGACGACTTGGCGAAGGAAGCTCGGCTGAGCAAGAGGACGCTGTACCTCTACTTCTCGGGGAAGGAGGATGTCGGGCTCTCCTCGATCGGCCGCGTTGTCGAGTCGGTGCATGCCGAGCTCGAACGGCTCGCCGATTCCTCTGCACACCCCGCCCATCGGTTGCGTCAGATGCTCGAGCGGCGCGTGATGGGCCGAGTGGAACAGGTGCAGGCCTATCACCAGAGCCTCGACGAGCTGTTCGAAGTGGTCCGCCCCGCCTACATGACGCGCCGGCAGCACTACTTCAATGTCGAGCGCGATTTGATCGCCGCCGTCCTCCACGAGGGCACACTCAGCGGTCAGTTTGCGGTTGCCGAACCGGCTACCACGGCCGAAGCTCTGCTCTTGGCCACCAACGCCTTCTTGCCTTACAGTCTCAGCGTTCGCGAACTCGGAAATCCCGAGGGCATTCGAACGCGACTGGCACCGATGCTCGATCTCCTCTTGCGAGGAGTCCAATCCCCAACCCACAAGGAAGCCCAACCATGA
PROTEIN sequence
Length: 218
MYHIDMAAIASTRTNPKPETREAILDACDRIMSRYGFRKMTMDDLAKEARLSKRTLYLYFSGKEDVGLSSIGRVVESVHAELERLADSSAHPAHRLRQMLERRVMGRVEQVQAYHQSLDELFEVVRPAYMTRRQHYFNVERDLIAAVLHEGTLSGQFAVAEPATTAEALLLATNAFLPYSLSVRELGNPEGIRTRLAPMLDLLLRGVQSPTHKEAQP*