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anamox2_Chloroflexi_60_8_curated

anamox2_Chloroflexi_60_1
In projects: anamox2  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 1-50 of 111 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox2_curated_scaffold_14523 5 3186 bp 60.30 1.00 99.15
anamox2_curated_scaffold_13896
Domain: Bacteria (66.67%)
3 3387 bp 61.00 1.00 95.04
anamox2_curated_scaffold_13192
Phylum: Chloroflexi (66.67%)
3 3470 bp 57.98 1.00 94.06
anamox2_curated_scaffold_13722
Phylum: Chloroflexi (100%)
4 3516 bp 62.32 1.00 80.38
anamox2_curated_scaffold_12377 6 3665 bp 54.82 1.00 88.24
anamox2_curated_scaffold_13118 5 3986 bp 61.44 1.00 88.21
anamox2_curated_scaffold_9335
Domain: Bacteria (80%)
5 4507 bp 59.68 1.00 72.95
anamox2_curated_scaffold_8379
Phylum: Chloroflexi (50%)
6 4952 bp 56.74 1.00 97.05
anamox2_curated_scaffold_9024
Domain: Bacteria (83.33%)
6 5128 bp 60.06 1.00 85.39
anamox2_curated_scaffold_8930
Domain: Bacteria (75%)
4 5138 bp 59.01 1.00 58.27
anamox2_curated_scaffold_8735
Phylum: Chloroflexi (60%)
5 5184 bp 57.97 1.00 68.23
anamox2_curated_scaffold_7514
Phylum: Chloroflexi (80%)
5 5402 bp 60.63 1.00 96.74
anamox2_curated_scaffold_7111
Phylum: Chloroflexi (66.67%)
6 5558 bp 56.30 1.00 90.68
anamox2_curated_scaffold_8792
Order: Rhizobiales (50%)
4 5934 bp 59.74 1.00 100.20
anamox2_curated_scaffold_7065
Phylum: Chloroflexi (71.43%)
7 5985 bp 59.08 1.00 80.70
anamox2_curated_scaffold_6881
Phylum: Chloroflexi (66.67%)
6 6021 bp 62.33 1.00 72.35
anamox2_curated_scaffold_6818
Domain: Bacteria (80%)
5 6035 bp 62.45 1.00 81.77
anamox2_curated_scaffold_6789
Phylum: Chloroflexi (66.67%)
6 6163 bp 62.13 1.00 92.15
anamox2_curated_scaffold_6005
Phylum: Chloroflexi (71.43%)
7 6354 bp 60.89 1.00 84.80
anamox2_curated_scaffold_6492
Phylum: Chloroflexi (66.67%)
9 6362 bp 59.89 1.00 88.65
anamox2_curated_scaffold_6297
Domain: Bacteria (66.67%)
9 6526 bp 60.85 1.00 97.78
anamox2_curated_scaffold_5245
Domain: Bacteria (87.5%)
8 7295 bp 59.19 1.00 84.22
anamox2_curated_scaffold_5123
Domain: Bacteria (66.67%)
6 7508 bp 59.31 1.00 73.20
anamox2_curated_scaffold_4723
Phylum: Chloroflexi (83.33%)
6 7800 bp 59.94 1.00 89.69
anamox2_curated_scaffold_4373
Domain: Bacteria (90%)
10 8521 bp 61.19 1.00 87.28
anamox2_curated_scaffold_4181
Phylum: Chloroflexi (85.71%)
7 8622 bp 58.86 1.00 92.87
anamox2_curated_scaffold_8589
Phylum: Chloroflexi (50%)
10 8745 bp 59.51 1.00 92.86
anamox2_curated_scaffold_3889
Domain: Bacteria (66.67%)
9 9174 bp 61.58 1.00 86.52
anamox2_curated_scaffold_3766
Phylum: Chloroflexi (71.43%)
7 9406 bp 62.26 1.00 89.53
anamox2_curated_scaffold_8746
Domain: Bacteria (71.43%)
7 9505 bp 59.82 1.00 64.42
anamox2_curated_scaffold_5338
Phylum: Chloroflexi (57.14%)
7 9660 bp 61.58 1.00 85.47
anamox2_curated_scaffold_3922
Phylum: Chloroflexi (62.5%)
8 9901 bp 59.28 1.00 95.29
anamox2_curated_scaffold_3530
Phylum: Chloroflexi (53.85%)
13 9922 bp 60.36 1.00 81.64
anamox2_curated_scaffold_3509
Phylum: Chloroflexi (100%)
10 9988 bp 60.38 1.00 94.58
anamox2_curated_scaffold_3506
Phylum: Chloroflexi (75%)
8 10056 bp 59.01 1.00 91.53
anamox2_curated_scaffold_3558
Phylum: Chloroflexi (88.89%)
9 10068 bp 60.94 1.00 90.88
anamox2_curated_scaffold_3353
Domain: Bacteria (100%)
9 10310 bp 58.90 1.00 92.71
anamox2_curated_scaffold_3402
Phylum: Chloroflexi (66.67%)
9 10352 bp 59.18 1.00 94.62
anamox2_curated_scaffold_3432
Domain: Bacteria (88.89%)
9 10441 bp 59.23 1.00 96.89
anamox2_curated_scaffold_3167
Domain: Bacteria (76.92%)
13 10774 bp 59.38 1.00 87.32
anamox2_curated_scaffold_3118
Domain: Bacteria (77.78%)
9 10911 bp 59.44 1.00 93.59
anamox2_curated_scaffold_3218
Domain: Bacteria (66.67%)
9 10972 bp 61.48 1.00 89.74
anamox2_curated_scaffold_2820
Domain: Bacteria (100%)
11 11694 bp 61.65 1.00 89.64
anamox2_curated_scaffold_2827
Phylum: Chloroflexi (64.29%)
14 11835 bp 58.22 1.00 93.71
anamox2_curated_scaffold_2535
Phylum: Chloroflexi (53.85%)
13 12844 bp 60.32 1.00 83.88
anamox2_curated_scaffold_2594
Phylum: Chloroflexi (63.64%)
11 12975 bp 59.29 1.00 89.60
anamox2_curated_scaffold_2499
Phylum: Chloroflexi (63.64%)
11 13000 bp 61.02 1.00 92.86
anamox2_curated_scaffold_5184
Phylum: Chloroflexi (70.59%)
17 13148 bp 60.41 1.00 85.90
anamox2_curated_scaffold_2368
Domain: Bacteria (78.57%)
14 13388 bp 60.70 1.00 89.65
anamox2_curated_scaffold_2336
Domain: Bacteria (92.31%)
13 13731 bp 61.93 1.00 90.21
Displaying items 1-50 of 111 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.