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anamox3_Bacteria_50_5_curated

anamox3_Bacteria_50_1
In projects: anamox3  |  LAC_year1  |  LAC_reactor_startup

Consensus taxonomy: Bacteria

Displaying items 51-100 of 203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox3_curated_scaffold_10694
Domain: Bacteria (100%)
6 6499 bp 50.30 1.00 91.49
anamox3_curated_scaffold_10077 6 4199 bp 46.92 1.00 91.74
anamox3_curated_scaffold_12821
Domain: Bacteria (50%)
6 6461 bp 48.82 1.00 88.18
anamox3_curated_scaffold_16581
Domain: Bacteria (100%)
6 3890 bp 47.76 1.00 79.67
anamox3_curated_scaffold_5780
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (66.67%)
6 6257 bp 50.98 1.00 79.06
anamox3_curated_scaffold_13710
Domain: Bacteria (83.33%)
6 5542 bp 48.59 1.00 98.85
anamox3_curated_scaffold_7535
Domain: Bacteria (50%)
6 5122 bp 51.03 1.00 80.42
anamox3_curated_scaffold_16390 6 4383 bp 48.44 1.00 85.72
anamox3_curated_scaffold_16777
Domain: Bacteria (100%)
6 5992 bp 46.04 1.00 81.76
anamox3_curated_scaffold_9911
Domain: Bacteria (66.67%)
6 6665 bp 48.21 1.00 77.42
anamox3_curated_scaffold_12659
Domain: Bacteria (50%)
6 5343 bp 51.51 1.00 97.70
anamox3_curated_scaffold_7117 6 5486 bp 48.40 1.00 80.88
anamox3_curated_scaffold_7572
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (66.67%)
6 5127 bp 53.77 1.00 93.86
anamox3_curated_scaffold_9431
Domain: Bacteria (83.33%)
6 4923 bp 52.31 1.00 97.44
anamox3_curated_scaffold_7447
Domain: Bacteria (66.67%)
6 5237 bp 50.09 1.00 79.74
anamox3_curated_scaffold_5010
Phylum: Ignavibacteriae (50%)
6 6985 bp 48.50 1.00 95.39
anamox3_curated_scaffold_13045
Domain: Bacteria (83.33%)
6 3470 bp 49.63 1.00 93.98
anamox3_curated_scaffold_13751
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (50%)
6 3808 bp 51.21 1.00 96.82
anamox3_curated_scaffold_10940
Domain: Bacteria (100%)
6 6584 bp 47.65 1.00 63.34
anamox3_curated_scaffold_8893
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (50%)
6 5968 bp 49.48 1.00 98.53
anamox3_curated_scaffold_9444
Domain: Bacteria (100%)
6 4406 bp 47.73 1.00 88.99
anamox3_curated_scaffold_7289
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (50%)
6 5331 bp 49.41 1.00 90.94
anamox3_curated_scaffold_5727
Domain: Bacteria (83.33%)
6 6358 bp 51.43 1.00 97.86
anamox3_curated_scaffold_7297
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (66.67%)
6 5296 bp 47.73 1.00 98.11
anamox3_curated_scaffold_5508
Domain: Bacteria (83.33%)
6 6519 bp 50.71 1.00 98.30
anamox3_curated_scaffold_6286
Domain: Bacteria (50%)
6 5944 bp 51.33 1.00 82.97
anamox3_curated_scaffold_8802
Domain: Bacteria (100%)
6 4650 bp 50.65 1.00 95.74
anamox3_curated_scaffold_11809
Domain: Bacteria (66.67%)
6 3735 bp 51.70 1.00 101.85
anamox3_curated_scaffold_6644
Phylum: RIF-IGX (60%)
5 5720 bp 50.66 1.00 96.40
anamox3_curated_scaffold_12572
Domain: Bacteria (80%)
5 3571 bp 49.20 1.00 87.54
anamox3_curated_scaffold_9273 5 4402 bp 50.68 1.00 96.16
anamox3_curated_scaffold_5826
Domain: Bacteria (80%)
5 6280 bp 48.68 1.00 94.54
anamox3_curated_scaffold_15153
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 3104 bp 48.94 1.00 94.91
anamox3_curated_scaffold_14045
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 3290 bp 50.40 1.00 95.20
anamox3_curated_scaffold_30282
Domain: Bacteria (100%)
5 4678 bp 46.64 1.00 82.79
anamox3_curated_scaffold_6935
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 8495 bp 51.98 1.00 93.48
anamox3_curated_scaffold_9036
Domain: Bacteria (80%)
5 4452 bp 51.30 1.00 97.24
anamox3_curated_scaffold_8917
Domain: Bacteria (60%)
5 4600 bp 48.54 1.00 96.65
anamox3_curated_scaffold_8841
Domain: Bacteria (60%)
5 4630 bp 51.81 1.00 96.16
anamox3_curated_scaffold_14903
Domain: Bacteria (100%)
5 4259 bp 48.72 1.00 88.96
anamox3_curated_scaffold_9512
Domain: Bacteria (100%)
5 5176 bp 51.41 1.00 97.60
anamox3_curated_scaffold_9929
Domain: Bacteria (60%)
5 4249 bp 49.56 1.00 96.80
anamox3_curated_scaffold_15370
Phylum: RIF-IGX (60%)
5 3071 bp 49.82 1.00 97.43
anamox3_curated_scaffold_5809
Domain: Bacteria (60%)
5 6290 bp 48.74 1.00 99.16
anamox3_curated_scaffold_16974
Domain: Bacteria (60%)
5 2844 bp 49.23 1.00 92.62
anamox3_curated_scaffold_7175
Domain: Bacteria (100%)
5 5407 bp 48.90 1.00 97.32
anamox3_curated_scaffold_21447
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 4047 bp 51.96 1.00 98.00
anamox3_curated_scaffold_10206 5 4161 bp 49.03 1.00 86.81
anamox3_curated_scaffold_8515
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 4760 bp 47.98 1.00 91.26
anamox3_curated_scaffold_7650
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (60%)
5 5145 bp 48.57 1.00 69.45
Displaying items 51-100 of 203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.