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anamox3_curated_scaffold_1590

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1590_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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27..2192
DNA (2166bp) protein (722aa)
Alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase {ECO:0000313|EMBL:CCW35572.1}; EC=3.2.1.24 {ECO:0000313|EMBL:CCW35572.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Alpha-mannosidase Tax=Chthonomonas calidirosea T49 RepID=S0EVV1_9BACT
anamox3_curated_scaffold_1590_2
unknown

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2189..2446
DNA (258bp) protein (86aa)

This feature has no annotations

anamox3_curated_scaffold_1590_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2443..4743
DNA (2301bp) protein (767aa)
Beta-galactosidase bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
beta-galactosidase
Tax=GWF2_Lentisphaerae_49_21_curated
anamox3_curated_scaffold_1590_4

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4740..4928
DNA (189bp) protein (63aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI0003715F23
Uncharacterized protein {ECO:0000313|EMBL:KKK82169.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox3_curated_scaffold_1590_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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4912..6666
DNA (1755bp) protein (585aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
anamox3_curated_scaffold_1590_6
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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6978..7118
DNA (141bp) protein (47aa)
Ribosomal protein L34 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DUH5_METI4
rpmH; ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
anamox3_curated_scaffold_1590_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7156..7515
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D69A80 related cluster Tax=unknown RepID=UPI0003D69A80
ribonuclease P protein component
anamox3_curated_scaffold_1590_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7797..9530
DNA (1734bp) protein (578aa)
Membrane protein insertase YidC Tax=Pedosphaera parvula Ellin514 RepID=B9XJP0_9BACT
YidC/Oxa1 family membrane protein insertase
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_1590_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9546..10079
DNA (534bp) protein (178aa)
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00035DD3B3
single-stranded nucleic acid binding R3H domain-containing protein
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_1590_10
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(10130..10531)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000364AECC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox3_curated_scaffold_1590_11
unknown

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comp(10528..12063)
DNA (1536bp) protein (512aa)

This feature has no annotations

anamox3_curated_scaffold_1590_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12229..14091)
DNA (1863bp) protein (621aa)
Type II and III secretion system protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V8_9BACT
Type II and III secretion system protein {ECO:0000313|EMBL:EDY16772.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type II and III secretion system protein
anamox3_curated_scaffold_1590_13
unknown

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comp(14072..14626)
DNA (555bp) protein (185aa)

This feature has no annotations

anamox3_curated_scaffold_1590_14
unknown

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comp(14623..15195)
DNA (573bp) protein (191aa)

This feature has no annotations

anamox3_curated_scaffold_1590_15
unknown

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comp(15192..15893)
DNA (702bp) protein (234aa)

This feature has no annotations

anamox3_curated_scaffold_1590_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(15900..17054)
DNA (1155bp) protein (385aa)
Type IV pilus assembly protein PilM Tax=Pedosphaera parvula Ellin514 RepID=B9XBV3_9BACT
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EEF62421.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
type IV pilus assembly protein PilM
anamox3_curated_scaffold_1590_17
unknown

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comp(17065..17226)
DNA (162bp) protein (54aa)

This feature has no annotations

anamox3_curated_scaffold_1590_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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18217..18720
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF9_THET1
N-acetyltransferase GCN5
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_1590_19
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19657..20535
DNA (879bp) protein (293aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HDX8_ARTCA
Uncharacterized protein {ECO:0000313|EMBL:EYU68735.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
peptidase S8/S53 subtilisin kexin sedolisin
anamox3_curated_scaffold_1590_20
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20633..20899
DNA (267bp) protein (89aa)
hypothetical protein Tax=Fischerella muscicola RepID=UPI0002D9D0D0
Uncharacterized protein {ECO:0000313|EMBL:KIJ73004.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
anamox3_curated_scaffold_1590_21
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20896..21387
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Cyanothece sp. CCY0110 RepID=A3IK24_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:EAZ93013.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
nucleic acid-binding protein, contains PIN domain
anamox3_curated_scaffold_1590_22

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comp(21537..21911)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371B4F4
Uncharacterized protein {ECO:0000313|EMBL:EKE15579.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anamox3_curated_scaffold_1590_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(21997..22413)
DNA (417bp) protein (139aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TE6_SOLUE
selenocysteine synthase-like protein
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein {ECO:0000313|EMBL:ABJ87074.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 23 items

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