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anamox3_curated_scaffold_508

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_508_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(122..1462)
DNA (1341bp) protein (447aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
diaminopimelate decarboxylase Tax=Verrucomicrobium spinosum RepID=UPI0001744D7F
diaminopimelate decarboxylase
anamox3_curated_scaffold_508_2
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..2371
DNA (711bp) protein (237aa)
sugar-phosphate nucleotidyltransferase (EC:2.7.7.-)
Sugar-phosphate nucleotidyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRI1_SYNAS
Tax=BJP_IG2102_Syntrophobacterales_60_12
anamox3_curated_scaffold_508_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2400..4067)
DNA (1668bp) protein (556aa)
DNA repair protein RecN Tax=Pedosphaera parvula Ellin514 RepID=B9XP66_9BACT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA recombination protein RecN
anamox3_curated_scaffold_508_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4178..4951
DNA (774bp) protein (258aa)
Lipoprotein A Tax=Stenotrophomonas maltophilia JV3 RepID=G0K3G7_STEMA
lipoprotein A
Lipoprotein A {ECO:0000313|EMBL:AEM52804.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
anamox3_curated_scaffold_508_5

Not on your lists

comp(4987..6249)
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
anamox3_curated_scaffold_508_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6299..6922)
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit bin=GWF2_Lentisphaerae_57_35 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
clpP; ATP-dependent Clp protease proteolytic subunit
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_508_7
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6960..8261)
DNA (1302bp) protein (434aa)
Trigger factor Tax=Pedosphaera parvula Ellin514 RepID=B9XKB4_9BACT
trigger factor
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_508_8
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9018..9884)
DNA (867bp) protein (289aa)
UTP--glucose-1-phosphate uridylyltransferase Tax=Rudanella lutea RepID=UPI00037A3D16
UTP-glucose-1-phosphate uridylyltransferase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
anamox3_curated_scaffold_508_9
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9881..10897)
DNA (1017bp) protein (339aa)
GHMP kinase Tax=Verrucomicrobium spinosum RepID=UPI00017463DB
GHMP kinase
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
anamox3_curated_scaffold_508_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10976..11518)
DNA (543bp) protein (181aa)
NUDIX hydrolase Tax=Pedosphaera parvula Ellin514 RepID=B9XPM5_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:EEF58253.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NUDIX hydrolase
anamox3_curated_scaffold_508_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11546..13978)
DNA (2433bp) protein (811aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D3R8_9BACT
anamox3_curated_scaffold_508_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(14108..14371)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4D4_9CHLA
rpsO; 30S ribosomal protein S15
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_508_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14607..15665)
DNA (1059bp) protein (353aa)
Oxidoreductase domain protein bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
oxidoreductase, N-terminal:oxidoreductase, C-terminal
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_508_14

Not on your lists

comp(15726..16406)
DNA (681bp) protein (227aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nth; DNA glycosylase/AP lyase; K10773 endonuclease III [EC:4.2.99.18] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
endonuclease III
anamox3_curated_scaffold_508_15
unknown

Not on your lists

comp(16348..17130)
DNA (783bp) protein (261aa)

This feature has no annotations

anamox3_curated_scaffold_508_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17142..18473
DNA (1332bp) protein (444aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:EEF62699.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EEF62699.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XB14_9BACT
anamox3_curated_scaffold_508_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18470..19570
DNA (1101bp) protein (367aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thrC_2; threonine synthase (EC:4.2.3.1)
Threonine synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYG2_9BACT
anamox3_curated_scaffold_508_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19581..20183
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3D7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19248.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
anamox3_curated_scaffold_508_19
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20208..20963)
DNA (756bp) protein (252aa)
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMG7_SOLCM
succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox3_curated_scaffold_508_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20960..22873)
DNA (1914bp) protein (638aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EEF57977.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EEF57977.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XQF3_9BACT
anamox3_curated_scaffold_508_21
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(22899..23630)
DNA (732bp) protein (244aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family Tax=Pedosphaera parvula Ellin514 RepID=B9XQF4_9BACT
succinate dehydrogenase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_508_22
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(23777..25042)
DNA (1266bp) protein (422aa)
Cell division protein FtsZ Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUV2_OPITP
cell division protein FtsZ
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox3_curated_scaffold_508_23

Not on your lists

comp(25035..26294)
DNA (1260bp) protein (420aa)
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Cell division protein ftsA bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
cell division protein FtsA
anamox3_curated_scaffold_508_24
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26291..27076)
DNA (786bp) protein (262aa)
Polypeptide-transport-associated domain protein FtsQ-type Tax=Pedosphaera parvula Ellin514 RepID=B9XIG3_9BACT
polypeptide-transport-associated domain-containing protein
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_508_25

Not on your lists

comp(27178..28104)
DNA (927bp) protein (309aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00036A9B62
ddlA; D-alanine-D-alanine ligase
anamox3_curated_scaffold_508_26
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28118..30475)
DNA (2358bp) protein (786aa)
UDP-N-acetylmuramate/alanine ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z4_9BACT
UDP-N-acetylmuramate--L-alanine ligase
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_508_27
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30472..31578)
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z5_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
anamox3_curated_scaffold_508_28

Not on your lists

comp(31601..32749)
DNA (1149bp) protein (383aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000372178C
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48691.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
stage V sporulation protein E
anamox3_curated_scaffold_508_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(32769..33611)
DNA (843bp) protein (281aa)
Membrane-bound lytic murein transglycosylase D precursor (EC:3.2.1.-)
Peptidoglycan-binding LysM Tax=Pedosphaera parvula Ellin514 RepID=B9XIG8_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EEF60429.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anamox3_curated_scaffold_508_30
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33649..35004)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TGB8_HELMI
murD; udp-n-acetylmuramoylalanine--d-glutamate ligase
Tax=RBG_16_Desulfobacca_60_12_curated
Displaying items 1-30 of 38 in total

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