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anamox3_curated_scaffold_2555

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2555_1
unknown

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1..300
DNA (300bp) protein (100aa)

This feature has no annotations

anamox3_curated_scaffold_2555_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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408..1733
DNA (1326bp) protein (442aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Sulfuricella denitrificans skB26 RepID=S6AIJ8_9PROT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=RBG_16_Betaproteobacteria_64_18_curated
anamox3_curated_scaffold_2555_3

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1741..2745
DNA (1005bp) protein (335aa)
Amidohydrolase 2 Tax=Opitutaceae bacterium TAV5 RepID=H1IM14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL22173.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox3_curated_scaffold_2555_4
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2586..3032)
DNA (447bp) protein (149aa)
Transposase Tax=Plesiocystis pacifica SIR-1 RepID=A6GIA8_9DELT
Transposase {ECO:0000313|EMBL:EDM79602.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
anamox3_curated_scaffold_2555_5
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3413..4150)
DNA (738bp) protein (246aa)
Putative zinc protease Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZWI0_DEHSC
zinc protease
Tax=RBG_16_Gamma2_64_11_curated
anamox3_curated_scaffold_2555_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4147..7158)
DNA (3012bp) protein (1004aa)
Restriction enzymes type I helicase subunit Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZWI1_DEHSC
restriction enzyme type I helicase subunit
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ETA69404.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
anamox3_curated_scaffold_2555_7
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(7161..7613)
DNA (453bp) protein (151aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
anamox3_curated_scaffold_2555_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7588..8175)
DNA (588bp) protein (196aa)
DNA polymerase beta domain protein region Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHR9_DESAR
DNA polymerase beta domain-containing protein region
Tax=RBG_13_Deltaproteobacteria_58_19_curated
anamox3_curated_scaffold_2555_trna_1
unknown

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9360..9433
DNA (74bp)
transferRNA Arg
anamox3_curated_scaffold_2555_9
unknown

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9446..10042
DNA (597bp) protein (199aa)

This feature has no annotations

anamox3_curated_scaffold_2555_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10050..11084
DNA (1035bp) protein (345aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase vitamin-B12 independent Tax=Chthoniobacter flavus Ellin428 RepID=B4D4L7_9BACT
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:EDY18470.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anamox3_curated_scaffold_2555_11
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11533..11910
DNA (378bp) protein (126aa)
PTS IIA-like nitrogen-regulatory protein PtsN bin=GWA2_Elusimicrobia_69_24 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative PTS IIA-like nitrogen-regulatory protein PtsN
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Displaying 12 items

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