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anamox3_Bacteria_67_15_curated

anamox3_Bacteria_66_1
In projects: anamox3  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Bacteria

Displaying items 51-100 of 144 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox3_curated_scaffold_1352
Domain: Bacteria (57.14%)
21 22261 bp 65.38 1.00 83.72
anamox3_curated_scaffold_1623
Domain: Bacteria (76.19%)
21 23076 bp 66.69 1.00 92.33
anamox3_curated_scaffold_1681
Domain: Bacteria (80.95%)
21 18268 bp 67.09 1.00 91.03
anamox3_curated_scaffold_935
Phylum: Chloroflexi (57.14%)
21 28720 bp 67.12 1.00 96.62
anamox3_curated_scaffold_1934
Domain: Bacteria (66.67%)
21 16253 bp 66.36 1.00 85.70
anamox3_curated_scaffold_2174
Domain: Bacteria (55%)
20 14041 bp 65.94 1.00 91.00
anamox3_curated_scaffold_1995
Domain: Bacteria (70%)
20 16371 bp 67.75 1.00 91.64
anamox3_curated_scaffold_1395
Domain: Bacteria (60%)
20 21664 bp 67.50 1.00 94.73
anamox3_curated_scaffold_3098
Phylum: Chloroflexi (55%)
20 17889 bp 66.16 1.00 94.63
anamox3_curated_scaffold_2572
Domain: Bacteria (85%)
20 19219 bp 64.83 1.00 91.64
anamox3_curated_scaffold_1387
Domain: Bacteria (57.89%)
19 20570 bp 67.23 1.00 91.05
anamox3_curated_scaffold_2618
Domain: Bacteria (61.11%)
18 11922 bp 67.26 1.00 89.73
anamox3_curated_scaffold_1887
Phylum: Chloroflexi (55.56%)
18 16979 bp 64.64 1.00 93.49
anamox3_curated_scaffold_1497
Domain: Bacteria (66.67%)
18 19229 bp 66.37 1.00 94.63
anamox3_curated_scaffold_1731
Domain: Bacteria (83.33%)
18 16789 bp 66.75 1.00 88.31
anamox3_curated_scaffold_2154
Domain: Bacteria (72.22%)
18 14177 bp 65.29 1.00 86.22
anamox3_curated_scaffold_2029
Phylum: Chloroflexi (50%)
18 14819 bp 66.61 1.00 95.37
anamox3_curated_scaffold_1915
Domain: Bacteria (61.11%)
18 16917 bp 67.19 1.00 93.35
anamox3_curated_scaffold_1404
Phylum: Chloroflexi (72.22%)
18 20077 bp 66.32 1.00 96.50
anamox3_curated_scaffold_2162
Domain: Bacteria (88.89%)
18 15216 bp 66.78 1.00 87.64
anamox3_curated_scaffold_3584
Domain: Bacteria (52.94%)
17 20247 bp 67.01 1.00 90.75
anamox3_curated_scaffold_4991
Domain: Bacteria (76.47%)
17 12928 bp 68.04 1.00 93.10
anamox3_curated_scaffold_1718
Domain: Bacteria (76.47%)
17 17375 bp 67.75 1.00 93.65
anamox3_curated_scaffold_2369
Phylum: Chloroflexi (52.94%)
17 16887 bp 66.89 1.00 87.48
anamox3_curated_scaffold_2003
Domain: Bacteria (88.24%)
17 15078 bp 66.73 1.00 88.86
anamox3_curated_scaffold_2774
Domain: Bacteria (75%)
16 12434 bp 67.60 1.00 90.53
anamox3_curated_scaffold_2068
Domain: Bacteria (75%)
16 16711 bp 68.32 1.00 84.18
anamox3_curated_scaffold_2463
Domain: Bacteria (62.5%)
16 12672 bp 68.21 1.00 89.84
anamox3_curated_scaffold_10088
Domain: Bacteria (80%)
15 7423 bp 66.48 1.00 93.12
anamox3_curated_scaffold_2089
Domain: Bacteria (80%)
15 14613 bp 67.21 1.00 91.85
anamox3_curated_scaffold_1522
Domain: Bacteria (86.67%)
15 19641 bp 66.48 1.00 93.69
anamox3_curated_scaffold_3008
Domain: Bacteria (57.14%)
14 10728 bp 65.36 1.00 86.55
anamox3_curated_scaffold_1999
Domain: Bacteria (71.43%)
14 15296 bp 66.78 1.00 93.99
anamox3_curated_scaffold_2560
Phylum: Chloroflexi (50%)
14 12735 bp 67.15 1.00 95.17
anamox3_curated_scaffold_7274
Domain: Bacteria (71.43%)
14 10524 bp 66.69 1.00 90.70
anamox3_curated_scaffold_2340
Phylum: Chloroflexi (71.43%)
14 14252 bp 67.41 1.00 87.67
anamox3_curated_scaffold_3043
Domain: Bacteria (85.71%)
14 10782 bp 66.17 1.00 90.56
anamox3_curated_scaffold_1494
Phylum: Chloroflexi (57.14%)
14 19119 bp 65.20 1.00 90.05
anamox3_curated_scaffold_4027
Domain: Bacteria (53.85%)
13 8711 bp 66.90 1.00 88.37
anamox3_curated_scaffold_3813
Phylum: Chloroflexi (53.85%)
13 14226 bp 66.02 1.00 97.93
anamox3_curated_scaffold_3365
Domain: Bacteria (69.23%)
13 10180 bp 64.81 1.00 91.62
anamox3_curated_scaffold_2847
Domain: Bacteria (61.54%)
13 11211 bp 67.32 1.00 96.52
anamox3_curated_scaffold_7718
Domain: Bacteria (58.33%)
12 9083 bp 66.04 1.00 72.65
anamox3_curated_scaffold_3875
Domain: Bacteria (75%)
12 10723 bp 68.11 1.00 85.64
anamox3_curated_scaffold_3625
Domain: Bacteria (58.33%)
12 10046 bp 64.97 1.00 90.64
anamox3_curated_scaffold_3509
Domain: Bacteria (66.67%)
12 9492 bp 65.98 1.00 84.10
anamox3_curated_scaffold_5283
Domain: Bacteria (83.33%)
12 7176 bp 66.79 1.00 94.02
anamox3_curated_scaffold_4845
Domain: Bacteria (54.55%)
11 7391 bp 65.36 1.00 87.82
anamox3_curated_scaffold_2749
Domain: Bacteria (72.73%)
11 11471 bp 68.37 1.00 86.91
anamox3_curated_scaffold_2733
Phylum: Chloroflexi (63.64%)
11 11608 bp 66.13 1.00 94.00
Displaying items 51-100 of 144 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.