ggKbase home page

anamox3_curated_scaffold_1982

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1982_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

1..645
DNA (645bp) protein (215aa)
Elongation factor Tu bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
tufA; elongation factor EF-Tu
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


694..1002
DNA (309bp) protein (103aa)
30S ribosomal protein S10 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S10
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


1019..1642
DNA (624bp) protein (208aa)
50S ribosomal protein L3 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
50S ribosomal protein L3
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


1651..2277
DNA (627bp) protein (209aa)
50S ribosomal protein L4 bin=GWB2_Ignavibacteria_35_12 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rplD; 50S ribosomal protein L4
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


2293..2598
DNA (306bp) protein (102aa)
50S ribosomal protein L23 bin=GWB2_Ignavibacteria_35_12 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rplW; 50S ribosomal protein L23
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


2628..3467
DNA (840bp) protein (280aa)
50S ribosomal protein L2 bin=GWF2_Ignavibacteria_33_9 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rplB; 50S ribosomal protein L2
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


3482..3772
DNA (291bp) protein (97aa)
30S ribosomal protein S19 bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
30S ribosomal protein S19
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


3791..4168
DNA (378bp) protein (126aa)
50S ribosomal protein L22 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
50S ribosomal protein L22
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


4173..4808
DNA (636bp) protein (212aa)
30S ribosomal protein S3 bin=GWA2_Ignavibacteria-rel_35_8 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
30S ribosomal protein S3
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


4829..5245
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=uncultured Bacteroidetes bacterium RepID=H5SG03_9BACT
rplP; 50S ribosomal protein L16
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


5248..5451
DNA (204bp) protein (68aa)
50S ribosomal protein L29 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
50S ribosomal protein L29P
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


5455..5757
DNA (303bp) protein (101aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
rpsQ; 30S ribosomal protein S17
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


5768..6136
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
50S ribosomal protein L14
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


6152..6478
DNA (327bp) protein (109aa)
50S ribosomal protein L24 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
rplX; 50S ribosomal protein L24
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


6493..7146
DNA (654bp) protein (218aa)
50S ribosomal protein L5 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
rplE; 50S ribosomal protein L5
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


7166..7435
DNA (270bp) protein (90aa)
30S ribosomal protein S14 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=RS14_PROVI
rpsN; 30S ribosomal protein S14
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


7455..7850
DNA (396bp) protein (132aa)
30S ribosomal protein S8 bin=GWB2_Ignavibacteria_35_12 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S8
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


7875..8414
DNA (540bp) protein (180aa)
50S ribosomal protein L6 bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
50S ribosomal protein L6
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


8442..8813
DNA (372bp) protein (124aa)
50S ribosomal protein L18 bin=GWB2_Ignavibacteria_35_12 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rplR; 50S ribosomal protein L18
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


8845..9348
DNA (504bp) protein (168aa)
30S ribosomal protein S5 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rpsE; 30S ribosomal protein S5
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1982_21
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


9380..9565
DNA (186bp) protein (62aa)
50S ribosomal protein L30 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rpmD; 50S ribosomal protein L30
Tax=BJP_IG2102_Ignavibacteriales_35_8
anamox3_curated_scaffold_1982_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


9582..10040
DNA (459bp) protein (153aa)
50S ribosomal protein L15 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rplO; 50S ribosomal protein L15
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


10033..11382
DNA (1350bp) protein (450aa)
Protein translocase subunit SecY bin=GWF2_Ignavibacteria_33_9 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
preprotein translocase, SecY subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

11384..12187
DNA (804bp) protein (268aa)
Methionine aminopeptidase bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
map; methionine aminopeptidase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_25
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

12188..12406
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Translation initiation factor IF-1
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

12419..12535
DNA (117bp) protein (39aa)
50S ribosomal protein L36 bin=GWA2_Ignavibacteria-rel_35_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
LSU ribosomal protein L36P
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1982_27
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


12551..12925
DNA (375bp) protein (125aa)
30S ribosomal protein S13 bin=GWF2_Ignavibacteria_33_9 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
30S ribosomal protein S13
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_28
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


12958..13338
DNA (381bp) protein (127aa)
30S ribosomal protein S11 bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rpsK; 30S ribosomal protein S11
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

13385..14398
DNA (1014bp) protein (338aa)
DNA-directed RNA polymerase subunit alpha bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rpoA; DNA-directed RNA polymerase subunit alpha
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1982_30
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


14436..14930
DNA (495bp) protein (165aa)
50S ribosomal protein L17 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
50S ribosomal protein L17
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 30 items

View Taxonomy