ggKbase home page

anamox3_curated_scaffold_3766_2

Organism: anamox3_Sphingobacteriales_44_6_curated

near complete RP 44 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(571..1161)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8D8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 146
  • Evalue 1.60e-32
Uncharacterized protein {ECO:0000313|EMBL:KIC95456.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 175.0
  • Bit_score: 152
  • Evalue 3.20e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 146
  • Evalue 4.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGGTTACAAACAGAGAACAGGAATTGTTGCTGGAGATTGCTTCAGGAAGCGAGCCTGCATTCAGAGAGTTGTTTCAGGCATATCGAAAGAAACTGTTCAGTTATGTTTTTAAAATAACCACCTCTAAAGAGATTGCGGAAGACGCCATCCAGGATATCTTTTTAAAATTATGGTCTGCCCGCGAGACCCTGCCCACTATCGGTAATATAAATGCTTATTTGCACCGTATGGCACACAACTATGCTTATCAGGGATTTCGACGACTGGCAAAAGAAACGCTGCTCCTGGATTACCTGCGnnnnnnGGGAGACAGTGATACCAGCACGCCCGTACAGGACTTGCTATCTAAAGAAGTAACCGACTATATCCGGGGATTGGTTGACCGGCTCACTCCACAGCAACGCAGAGTCTTCCTGTTGAGCCGCGAGGAAGGCTTGAAGCAGGAAGAAATTGCACGCCGCCTCAATGTTTCTATCTTCACTGTTAAAAAGCATATGGTGGACGCCCTGGCTTTTCTGAGGGAAGATATCCGGCAAAACTATAGTTTGTATGCCGGTGCAGTAATCGTTATCCATCAGCTTTATTTGTGA
PROTEIN sequence
Length: 197
MVTNREQELLLEIASGSEPAFRELFQAYRKKLFSYVFKITTSKEIAEDAIQDIFLKLWSARETLPTIGNINAYLHRMAHNYAYQGFRRLAKETLLLDYLXXXGDSDTSTPVQDLLSKEVTDYIRGLVDRLTPQQRRVFLLSREEGLKQEEIARRLNVSIFTVKKHMVDALAFLREDIRQNYSLYAGAVIVIHQLYL*