ggKbase home page

anamox1_curated_scaffold_2046_28

Organism: anamox1_Bacteria_45_8_curated

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 ASCG 11 / 38
Location: comp(29935..30504)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=BACIGN_2 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 184.0
  • Bit_score: 220
  • Evalue 8.60e-55
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 190.0
  • Bit_score: 102
  • Evalue 7.40e-20
Tax=BJP_IG2069_Ignavibacteriae_38_11 similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 173
  • Evalue 2.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2069_Ignavibacteriae_38_11 → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 570
ATGCATGCTTTAACGACGACAAAAACCTACGCCGATGCCGAATTATTTGCGATGCTTTCCGGCAGTACGTCTGAGGCTCAAACGGGACTGGCCATGCTGTACGACAGGTATTCTCAACGTATTTTTACATACTGTAGAAAAATAACGGGAAACAGCTCGGCGGCCGAGGATTTGCTTCAGGAAACTTTCGCACGTTTTTTCGAGTCTGCAAAGCGCGTTCGGTCGGCAGAGAATGTAGCCGGCTATTTATTTGCCATAGCCCGCAATCAATGCCTTAATTACAAGGCCAAACGTCGGGAGGAATTGGTTTTGCCCGAAGATATTGAATTAGCGTCGCGAGATCGTCCTTACGAGCAGCAGGAGCTTCTCGACATCCTTGGACGCGCTCTCGATTTGTTGCCCGACGACTATCGCGAGGCTTTTATATTGCGCGAATACAACGGTATGTCGTACAATGAAATAGCCGAAACCATAGGCGTGTCTCTCGATATTGTGAAAATACGCCTTTTCCGAGCGAAGAAAAAATTGCGGGAAATACTCGCACCTTACCTTATTGATTTGAATGTCTGA
PROTEIN sequence
Length: 190
MHALTTTKTYADAELFAMLSGSTSEAQTGLAMLYDRYSQRIFTYCRKITGNSSAAEDLLQETFARFFESAKRVRSAENVAGYLFAIARNQCLNYKAKRREELVLPEDIELASRDRPYEQQELLDILGRALDLLPDDYREAFILREYNGMSYNEIAETIGVSLDIVKIRLFRAKKKLREILAPYLIDLNV*