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anamox1_curated_scaffold_2

Search features with annotation key words

Displaying items 121-150 of 497 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2_121

Not on your lists

comp(166475..167950)
DNA (1476bp) protein (492aa)
radical SAM domain protein bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
Radical SAM protein {ECO:0000313|EMBL:EKD42201.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
radical SAM domain-containing protein
anamox1_curated_scaffold_2_122
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(169023..169559)
DNA (537bp) protein (179aa)
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase Tax=Brachyspira pilosicoli P43/6/78 RepID=L0EXN0_BRAPL
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase {ECO:0000313|EMBL:CCG57030.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli WesB.;"
anamox1_curated_scaffold_2_123
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169784..171469)
DNA (1686bp) protein (562aa)
Putative lipoprotein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CDL4_MYXFH
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
anamox1_curated_scaffold_2_trna_14
unknown

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comp(171631..171704)
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_2_trna_13
unknown

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comp(171717..171808)
DNA (92bp)
transferRNA Ser
anamox1_curated_scaffold_2_124
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

171951..172361
DNA (411bp) protein (137aa)
transmembrane_regions 7..29 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
anamox1_curated_scaffold_2_125
unknown

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172464..172736
DNA (273bp) protein (91aa)

This feature has no annotations

anamox1_curated_scaffold_2_trna_12
unknown

Not on your lists

comp(172759..172845)
DNA (87bp)
transferRNA Ser
anamox1_curated_scaffold_2_126
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172851..174119)
DNA (1269bp) protein (423aa)
Serine--tRNA ligase Tax=Geobacter metallireducens RepID=SYS_GEOMG
seryl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
anamox1_curated_scaffold_2_127

Not on your lists

comp(174147..175193)
DNA (1047bp) protein (349aa)
DsbA oxidoreductase bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
DsbA oxidoreductase {ECO:0000313|EMBL:EKD42674.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative lipoprotein
anamox1_curated_scaffold_2_128
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175365..177794)
DNA (2430bp) protein (810aa)
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein bin=GWC2_Proteo_65_14_Ab886 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
3-hydroxyacyl-CoA dehydrogenase
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_2_129
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177891..179057)
DNA (1167bp) protein (389aa)
Acetyl-CoA acetyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFT8_9CHLR
acetyl-CoA acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
anamox1_curated_scaffold_2_130
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179235..180923
DNA (1689bp) protein (563aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase Tax=Beggiatoa alba B18LD RepID=I3CEE4_9GAMM
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_2_131
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181477..181902)
DNA (426bp) protein (142aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000313|EMBL:ABF85946.1}; EC=3.1.26.4 {ECO:0000313|EMBL:ABF85946.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Ribonuclease H Tax=Myxococcus xanthus RepID=Q1D0F7_MYXXD
anamox1_curated_scaffold_2_132
unknown

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comp(181899..182177)
DNA (279bp) protein (93aa)

This feature has no annotations

anamox1_curated_scaffold_2_133
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182228..182929)
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKU4_THEYD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
anamox1_curated_scaffold_2_trna_11
unknown

Not on your lists

comp(182967..183040)
DNA (74bp)
transferRNA Met
anamox1_curated_scaffold_2_134
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183050..184912)
DNA (1863bp) protein (621aa)
RNA polymerase sigma factor RpoD Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TSK9_9DELT
rpoD; RNA polymerase sigma factor RpoD
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
anamox1_curated_scaffold_2_135
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184893..186650)
DNA (1758bp) protein (586aa)
DNA primase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA primase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
anamox1_curated_scaffold_2_136
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(186718..187161)
DNA (444bp) protein (148aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GatB/Yqey domain-containing protein
Tax=GWC2_Nitrospirae_57_9_curated
anamox1_curated_scaffold_2_137
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187237..187428)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpsU; 30S ribosomal protein S21
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
anamox1_curated_scaffold_2_138
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(187586..187933)
DNA (348bp) protein (116aa)
HIT family hydrolase Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D08B
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGA58488.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
anamox1_curated_scaffold_2_139
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187961..188347)
DNA (387bp) protein (129aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HIS3_METBU
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
anamox1_curated_scaffold_2_140
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(188344..189105)
DNA (762bp) protein (254aa)
imidazole glycerol phosphate synthase subunit hisf (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
Imidazole glycerol phosphate synthase subunit HisF Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TJL7_CALNY
anamox1_curated_scaffold_2_141
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(189107..189832)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase bin=GWF2_OP3_38_59 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
anamox1_curated_scaffold_2_142
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189829..190431)
DNA (603bp) protein (201aa)
Imidazole glycerol phosphate synthase subunit HisH bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hisH; imidazole glycerol phosphate synthase subunit HisH
Tax=GWB2_Deltaproteobacteria_55_19_curated
anamox1_curated_scaffold_2_143
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190461..191048)
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=HIS7_GEOUR
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_2_144
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191199..192233
DNA (1035bp) protein (345aa)
ade:Adeh_3453 biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
biotin synthase (EC:2.8.1.6)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
anamox1_curated_scaffold_2_145

Not on your lists

192328..193536
DNA (1209bp) protein (403aa)
pca:Pcar_1665 bioF; 8-amino-7-oxononanoate synthase; K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47] bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
8-amino-7-oxononanoate synthase {ECO:0000256|SAAS:SAAS00087543}; EC=2.3.1.47 {ECO:0000256|SAAS:SAAS00087543};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
anamox1_curated_scaffold_2_146
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193544..194872
DNA (1329bp) protein (443aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA (EC:2.6.1.62)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] bin=GWC2_NOV_55_46 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
Displaying items 121-150 of 497 in total

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