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anamox1_curated_scaffold_1553

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1553_1
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1229)
DNA (1227bp) protein (409aa)
DNA protecting protein DprA Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SM72_PLABD
DNA protecting protein DprA
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
anamox1_curated_scaffold_1553_2
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1211..2116)
DNA (906bp) protein (302aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase {ECO:0000313|EMBL:AKF93640.1}; EC=2.7.1.148 {ECO:0000313|EMBL:AKF93640.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Brevibacillus laterosporus RepID=F7TSL3_BRELA
anamox1_curated_scaffold_1553_3
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..3579)
DNA (1428bp) protein (476aa)
Fis family transcriptional regulator Tax=Thermodesulfatator atlanticus RepID=UPI0003B77D47
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACD95410.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
anamox1_curated_scaffold_1553_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3594..4976)
DNA (1383bp) protein (461aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAR8_AMMDK
two component, sigma54 specific, transcriptional regulator, Fis family
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACX51345.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
anamox1_curated_scaffold_1553_5
unknown

Not on your lists

comp(4973..5233)
DNA (261bp) protein (87aa)

This feature has no annotations

anamox1_curated_scaffold_1553_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5314..11244)
DNA (5931bp) protein (1977aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003632E0F
glycosyl transferase family protein
Tax=RBG_16_Chloroflexi_68_14_curated
anamox1_curated_scaffold_1553_7
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

11709..14213
DNA (2505bp) protein (835aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000378FCC9
ABC transporter
Tax=CG_Arma_01
anamox1_curated_scaffold_1553_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14210..15154
DNA (945bp) protein (315aa)
RbsC Tax=Rhizobium radiobacter RepID=UPI0003659C86
RbsC {ECO:0000313|EMBL:EPR22171.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
inner-membrane translocator
anamox1_curated_scaffold_1553_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(15228..16658)
DNA (1431bp) protein (477aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
glutamyl-tRNA(Gln) amidotransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000361E3E8
anamox1_curated_scaffold_1553_10
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16759..17901)
DNA (1143bp) protein (381aa)
Glycosyltransferase Tax=Azospirillum sp. (strain B510) RepID=D3P891_AZOS1
Glycosyltransferase {ECO:0000313|EMBL:AKB29605.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
glycosyltransferase
anamox1_curated_scaffold_1553_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17967..19223)
DNA (1257bp) protein (419aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UEQ7_MYXSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
anamox1_curated_scaffold_1553_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(19220..19993)
DNA (774bp) protein (258aa)
ABC-type Fe3+ transport system protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SR90_9DELT
cytochrome c family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
anamox1_curated_scaffold_1553_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(19993..20517)
DNA (525bp) protein (175aa)
ABC-type Fe3+ transport system protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
anamox1_curated_scaffold_1553_14
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(20514..21968)
DNA (1455bp) protein (485aa)
NrfD family oxidoreductase membrane subunit Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULP7_MYXSD
NrfD family oxidoreductase membrane subunit
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
anamox1_curated_scaffold_1553_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(21961..25017)
DNA (3057bp) protein (1019aa)
Fe-S-cluster-containing hydrogenase subunit bin=GWA2_Elusimicrobia_66_18 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative iron-sulfur binding oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
anamox1_curated_scaffold_1553_16
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25032..25685)
DNA (654bp) protein (218aa)
Cytochrome c3 bin=GWA2_Elusimicrobia_66_18 species=Croceibacter atlanticus genus=Croceibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cytochrome c2
Tax=CG_Delta_02
anamox1_curated_scaffold_1553_17
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(25751..25999)
DNA (249bp) protein (83aa)
Putative C4-dicarboxylate transporter protein Tax=planctomycete KSU-1 RepID=I3IQE6_9PLAN
C4-dicarboxylate transporter
Tax=RBG_13_Chloroflexi_48_10_curated
Displaying 17 items

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