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anamox1_curated_scaffold_2570_4

Organism: anamox1_Bacteria_55_18_curated

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3004..3366

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor SigF Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YW47_LYNSP similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 120.0
  • Bit_score: 188
  • Evalue 3.00e-45
Sigma factor SigF {ECO:0000313|EMBL:EAW34815.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 120.0
  • Bit_score: 188
  • Evalue 4.20e-45
cupin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 180
  • Evalue 2.30e-43

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Taxonomy

Lyngbya sp. PCC 8106 → Lyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGCCGAAACTGATTGAAACCGCTTCACGGATTACAGCTGCCGGAAACCAGCCAAAGATCATCGAGGAATTTGTCGGCAGAGTGAATTCAAAAACAGAGGCTGTCAGCATTGCCTGGATGCACAGCCCTTCCGGATGGATTGAGCCGGGGCAGACCCCCGAGTTCGATGAATACACCCTGGTTCTCAAAGGCAGCCTGAGAGTGGCCTTCGAGGGAGGCAGCATGGAGGTTCAGGCAGGACAGGCGGTCATTGCCAGTCGCGGGGAATGGGTTCAATACAGCTCACCCGGTGAGGAGGGCGCGGAGTATATCGCGGTCTGTATTCCGGCTTTCTCGCCAGACACAGTCCATCGGGATGAATGA
PROTEIN sequence
Length: 121
MPKLIETASRITAAGNQPKIIEEFVGRVNSKTEAVSIAWMHSPSGWIEPGQTPEFDEYTLVLKGSLRVAFEGGSMEVQAGQAVIASRGEWVQYSSPGEEGAEYIAVCIPAFSPDTVHRDE*