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anamox1_curated_scaffold_9989_4

Organism: anamox1_Bacteria_65_5_curated

partial RP 33 / 55 MC: 2 BSCG 31 / 51 ASCG 8 / 38
Location: comp(3735..4181)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E461_GEOLS similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 148.0
  • Bit_score: 144
  • Evalue 8.10e-32
DNA-directed RNA polymerase subunit sigma {ECO:0000313|EMBL:AKG34196.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 147.0
  • Bit_score: 147
  • Evalue 1.30e-32
DNA-directed RNA polymerase subunit sigma similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 147.0
  • Bit_score: 145
  • Evalue 1.00e-32

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Taxonomy

Paenibacillus durus → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
CAGCTGATCGAAGCGATTGAACAGCGCCAGAGCACACTGGAACGTGTCGCCAAGGCAATCCTGAAGCGTCAGGAGGATTTCATGCGCATGGGCATGACAGGACTGAAGCCCATGAAGATGCAGGATATCGCCGACGAACTGGGAATCCACCACAGCACGGTCTGGCGCGCCGTCTACGGCAAGTACATGCAGACCCCTCAGGGCGTGTACGCCATGAACGAGTTGTTCACCGGCGGCCTGCCCGGAGCTGACAGTGACGTCAGCCGCGAAGCCGTGAAGCTCAAGGTTAAGGAGATTGTAGACGGCGAGGACGGCAGCAAGCCGCTGTCTGACCTCGCCATCGCCCGCCGGCTTGAAGAACTGGGCATACAGGCCAGCCGGCGTGTGGTGACCAAATACCGTGAAGAACTCGGCATTGCCGACAGCCGCGTCCGGCGCCAGCATTGA
PROTEIN sequence
Length: 149
QLIEAIEQRQSTLERVAKAILKRQEDFMRMGMTGLKPMKMQDIADELGIHHSTVWRAVYGKYMQTPQGVYAMNELFTGGLPGADSDVSREAVKLKVKEIVDGEDGSKPLSDLAIARRLEELGIQASRRVVTKYREELGIADSRVRRQH*