ggKbase home page

anamox1_curated_scaffold_18054_2

Organism: anamox1_Bacteria_65_5_curated

partial RP 33 / 55 MC: 2 BSCG 31 / 51 ASCG 8 / 38
Location: 1089..2321

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.9
  • Coverage: 416.0
  • Bit_score: 135
  • Evalue 1.10e-28
Aconitate hydratase (EC:4.2.1.3) similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 311.0
  • Bit_score: 117
  • Evalue 4.80e-24
3-isopropylmalate dehydratase large subunit Tax=Clostridium sp. ATCC BAA-442 RepID=U2D8D7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 416.0
  • Bit_score: 135
  • Evalue 7.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavonifractor plautii → Flavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1233
ATGCCGCACACGCCCCAGCCAGCCGTTGTTCGCCTGATCCAGAACATGACCAGCGCGCGCAACCTGGTGCCGGGCGACCGCGTTGCCGTGCGCCCGCACCTGGTGCTGCTTACAGACCACGACATTGCCGCGGCGCTGTCTGAACTTACGGCCCCCGGCGGCAGGGCTTCTGCCGGCGCGCGAGTAGCAGTGGCATGTCGCGACGCCTCGCTGCGTGCACGGGCAGCCGACGCCGGCTTCACCCAGTGCCTTGATCCGGGCTGCGAGATCCGCCAGATCCTGGAGCGTTCCTGGCTTGTGCCCGGGGAGTGCCTGGCCGGCTCGCCTGCATCGGTGCATGCGTTCGGCGGGATCGGCGCGCTGGGCCTGCGCGTGACCGGCCGCGACCTGGGCCGGCTTGCGGCGGGGCACACAATCGACATCTCAGTCCCCGAGGTCGTGCGGGTCGACCTGTCCGGCCAGCGTCCGCCCCAGGTGGGCGGGCGTGATGTTTTCTACTGCCTGAGCAAAGAGCTGCGGGTCGACGCCCTGGCCGGCAAGGCCCTGGAACTGCATGGGCCCGGCCTTGCGAACCTGCGGGTGTTCGAACGTTTCGGCCTGGCCTCGCTGGCGGGAAATGCCGGCCTGTTTGCCCTGTTCTGCAGCATGGACCGCACAGCGGTGCAGGAAATGAACGCGGCGGTAACACGCCCGTACGTCACACTGGAACCCGAGCGCGGCGCGACATGGTGCCATCAGGCAGGCCTGGACTTGGGACGCACGGCAGTGATGGCAACTCCCCCGGAGGGGCCGGGCAATGCCAGGGGCATTGCAGAATTCCACGGCGAACGCATCGACCAGGTGATCCTGGGCGGCGACGCTTCCTGCGGCATCGAGGTGCTGCGCCACGCCGCCGCGGTCATCAAGCCGAGGGGCCTGCACCAGGGCCTGGTGTGCGACCTGGTACCGGACAGCGCCGCCACAGCATCCACCGATGAGGCACGCGAGTGTCTGGAGACCCTCAGCGAAGCCGGCGTGACCGTACACGCCCCGGGCACACCCCCATCCAGTCTGGTGCAACCGCAGCGTAAGGCGCTGGTCACAACGATCAGCGCGCCCCCCGGCGCGTGGCGGGCCGGCCCGTTCACCGCGGCCTTTGTGGCCTGCGCCGGAATGCTGATTCACCCGGAACGGATAGACGCCCAGCCCCAGCGCGACAGCAAACTGTCAGGCCGCCGCCCCAGGCCTGCTTAG
PROTEIN sequence
Length: 411
MPHTPQPAVVRLIQNMTSARNLVPGDRVAVRPHLVLLTDHDIAAALSELTAPGGRASAGARVAVACRDASLRARAADAGFTQCLDPGCEIRQILERSWLVPGECLAGSPASVHAFGGIGALGLRVTGRDLGRLAAGHTIDISVPEVVRVDLSGQRPPQVGGRDVFYCLSKELRVDALAGKALELHGPGLANLRVFERFGLASLAGNAGLFALFCSMDRTAVQEMNAAVTRPYVTLEPERGATWCHQAGLDLGRTAVMATPPEGPGNARGIAEFHGERIDQVILGGDASCGIEVLRHAAAVIKPRGLHQGLVCDLVPDSAATASTDEARECLETLSEAGVTVHAPGTPPSSLVQPQRKALVTTISAPPGAWRAGPFTAAFVACAGMLIHPERIDAQPQRDSKLSGRRPRPA*