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anamox1_curated_scaffold_6651_6

Organism: anamox1_Bacteroidetes_38_5_curated

partial RP 33 / 55 BSCG 38 / 51 ASCG 14 / 38 MC: 1
Location: comp(5078..5662)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Sphingobacterium sp. (strain 21) RepID=F4C804_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 187.0
  • Bit_score: 233
  • Evalue 1.70e-58
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KIA88608.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 235
  • Evalue 4.90e-59
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 187.0
  • Bit_score: 233
  • Evalue 4.90e-59

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAATAGACAACAAATTTCAGACAGAGATTTAATTCGCAATTTTATTGCCGGCAATGAAGCTTGTATGGAAATGCTCGTTAAGCGTTATAAATCGAAGCTTTACACTACAATCTATCTTGTTGTACAAGATACATATATTGCCGAGGACATCTTTCAAGAAACCTTTATTAAGGTTATCAGAACTTTCAAGTCCGGTAAGTATGAAGAGAATGACAAGTTTAAACAGTGGATTATGCGCATCGCTCGCAACCTCGCGATTGATTATTACCGCAAAGTAAAGAAAATGCCCAAAATCACACGCGATGACGGCAGTGATGTTTTTGAAACACTGAATTTTTTTGAAACCAATATTGAAGACAGAATTGTTCAAAACGAGCGCGAAAAAGTGATTAGACGTTTTGTAAAAGAATTACCGGAAGAACAAAAGGAAGTGCTTATTCTCAGACACTATGGAGATTTGAGTTTTAAAGAAATTTCTGATTTAACCGGTATTAGTATTAATACTGCTTTGGGAAGAATGCGTTATGCGCTTATAAATCTTCGAAAGATGATTAATACACATGCTCCTGACCTTAATAAATAG
PROTEIN sequence
Length: 195
MNRQQISDRDLIRNFIAGNEACMEMLVKRYKSKLYTTIYLVVQDTYIAEDIFQETFIKVIRTFKSGKYEENDKFKQWIMRIARNLAIDYYRKVKKMPKITRDDGSDVFETLNFFETNIEDRIVQNEREKVIRRFVKELPEEQKEVLILRHYGDLSFKEISDLTGISINTALGRMRYALINLRKMINTHAPDLNK*