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anamox1_curated_scaffold_3856_10

Organism: anamox1_Bacteroidetes_38_5_curated

partial RP 33 / 55 BSCG 38 / 51 ASCG 14 / 38 MC: 1
Location: comp(8074..8970)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 281.0
  • Bit_score: 424
  • Evalue 1.10e-115
DNA-directed RNA polymerase subunit beta' Tax=Sphingobacterium sp. (strain 21) RepID=F4CDT1_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 280.0
  • Bit_score: 419
  • Evalue 2.00e-114
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 280.0
  • Bit_score: 419
  • Evalue 5.70e-115

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 897
GCAAGAAACCCTTCTAATCCCGCTGTTGTGTCAGAAATTGATGGTGTTGTTACCTATGGTGGTATCAAACGAAGCAATAGAGAGATTGTAGTCGAGTCCAGAGAAGGTGATGTAAAACGCTACTTAGTACCTTTGTCTAAACATATTTATGTACAAGATGGTGATTTTATAAAAGCAGGTAATCCTCTTTCAGATGGCGCAATTACACCTCAAGATATTCTGAGAGTTCAGGGTCCTACTGCGGTTCAGGAATATATTCTCAATGGAATCCAAGAAGTGTATAGATTACAAGGTGTAAAAATCAATAATAAACACATTGAAATTATTATTCGCCAAATGATGCAAAAGGTTGAAATTGTTGAGTCCGGAGACACTATCTTATTGGAAGGTGAATCGGTTGAAAAGTGGGAGTTTAATCAAGAAAACGATGCAATTTTTGATAAGAAAGTTGTATTAGATGCAGGTGATTCAACTACTATGAAACCAGGTCAGGTCGTTTCATTGAGAGAATTACGTGAAGAAAACTCGAAATTGAAGAGACAGGATATGAAGCAAATAGAGGTAAGAGATGCTGTAGCAGCAACCATGACACCTTTACTTCAAGGTATTACTAAAGCATCGTTGGGAACTCAAAGCTTCTTGTCTGCTGCATCGTTCCAAGAAACAACGAAAGTGTTAAATGAAGCTTCTATTTCTGGTAAAGTTGATGACTTACGAGGATTGAAAGAGAACGTAATAGTAGGGCATCTCATACCTGCCGGAACAGGATTAAGAGAATATGATGATATTGTGGTTGGTTCAAAAGAAGAATATGAAATGTTGTTAGCTTCTAAAAATGACTCATATAGTACAGATAGTCATGATAGGGAAGAAACAGTGTCATCTGCTTCACACTAA
PROTEIN sequence
Length: 299
ARNPSNPAVVSEIDGVVTYGGIKRSNREIVVESREGDVKRYLVPLSKHIYVQDGDFIKAGNPLSDGAITPQDILRVQGPTAVQEYILNGIQEVYRLQGVKINNKHIEIIIRQMMQKVEIVESGDTILLEGESVEKWEFNQENDAIFDKKVVLDAGDSTTMKPGQVVSLRELREENSKLKRQDMKQIEVRDAVAATMTPLLQGITKASLGTQSFLSAASFQETTKVLNEASISGKVDDLRGLKENVIVGHLIPAGTGLREYDDIVVGSKEEYEMLLASKNDSYSTDSHDREETVSSASH*