ggKbase home page

anamox1_curated_scaffold_197_33

Organism: anamox1_Bacteroidetes_39_16_curated

near complete RP 53 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(45550..45858)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU Tax=Pedobacter sp. BAL39 RepID=A6EB37_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 95.0
  • Bit_score: 139
  • Evalue 1.40e-30
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 95.0
  • Bit_score: 139
  • Evalue 3.90e-31
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACU02354.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 95.0
  • Bit_score: 139
  • Evalue 1.90e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 309
ATGACAAAAGCAGAGTTGGTAAATGAAATTTCGGTAAAAACCGGAGTAGAGAAAATGGTGGTGCAGAATGTAGTTGAGTCCATGATGAAGGTGGTAAAGAACTCATTGGTGCAACATGACAATGTTTATTTGAGAGGTTTCGGTAGTTTTATAGTTAAAAAAAGAGCTCAAAAAACCGGCCGAATTATTACAAAAAATACAGCTATTATTATTCCGGAGCATTTTATTCCTGCATTTAAACCGGCTAAGACCTTTACCGATAAAGTAAAGAATGCTCATAAAAAGAAAGAATCTCAACCTCAGTTGTAA
PROTEIN sequence
Length: 103
MTKAELVNEISVKTGVEKMVVQNVVESMMKVVKNSLVQHDNVYLRGFGSFIVKKRAQKTGRIITKNTAIIIPEHFIPAFKPAKTFTDKVKNAHKKKESQPQL*