ggKbase home page

anamox1_curated_scaffold_719_11

Organism: anamox1_Bacteroidetes_39_16_curated

near complete RP 53 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 9861..10568

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 222.0
  • Bit_score: 266
  • Evalue 1.80e-68
tRNA pseudouridine synthase B Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U6Y2_CROAH similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 222.0
  • Bit_score: 266
  • Evalue 1.30e-68
tRNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 222.0
  • Bit_score: 266
  • Evalue 3.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Croceibacter atlanticus → Croceibacter → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGATTTTCAGCAAGGGCAGGTACTTTTAGTTGACAAACCACTGGAGTGGACATCATTTGATGTGGTGAACAAACTGCGAAGAGCATTGCAGCATCTGAAAGACAAAGAAGGTAAAAAACCGTTTAAGAATATTAAAGTCGGTCATGCAGGAACATTAGATCCTCTTGCTACGGGATTACTGATTATTTGCACCGGTGCAGCAACAAAAACCATAGAGCAACTGATGGGCTTTGAAAAAGAATATACCGGTACTATTTTTCTTGGTGCTTCTACCCCATCATTCGACAAGGAAACTGAAGTGGATGCACATTATGAAACATCGCACATAACTGAGGAACTCATTACAAAAGTTGCAAAGCAATTTACAGGAAATATTTTGCAGGTTCCGCCAGCTCATTCAGCAACCATTATCAAGGGCGAGCGTGCCTATGAAAAAGCTCGAAGAGGTGAAGCGGTTGACATGCCTCCAAAACAGGTTACCATTTCAGTTTTTGATATTGTAAAAATTGAAATGCCGCTGGTGCATTTCAAAGTGGTTTGCAGCAAAGGAACCTATATACGTTCGCTTGCAAATGATTTTGGCAAAGCATTGCAATCGGGAGCTTACCTGCATTCGCTGTGCAGAACACGCATAGGAGAATTTTCACTTGATAAAGCCAAACAGGTAGATGTTCTCGTAAAAGAAATCAAACAATCTGTAACTTAA
PROTEIN sequence
Length: 236
MDFQQGQVLLVDKPLEWTSFDVVNKLRRALQHLKDKEGKKPFKNIKVGHAGTLDPLATGLLIICTGAATKTIEQLMGFEKEYTGTIFLGASTPSFDKETEVDAHYETSHITEELITKVAKQFTGNILQVPPAHSATIIKGERAYEKARRGEAVDMPPKQVTISVFDIVKIEMPLVHFKVVCSKGTYIRSLANDFGKALQSGAYLHSLCRTRIGEFSLDKAKQVDVLVKEIKQSVT*