ggKbase home page

anamox1_curated_scaffold_236_40

Organism: anamox1_Bacteroidetes_63_11_curated

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: 44845..45462

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SB65_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 205.0
  • Bit_score: 288
  • Evalue 4.80e-75
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 205.0
  • Bit_score: 291
  • Evalue 7.90e-76
50S ribosomal protein L3P similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 205.0
  • Bit_score: 288
  • Evalue 1.40e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 618
ATGAGCGGATTGATCGGAAAAAAGATCGGGATGACCAGCCTCTACGACGGGCAGGGCAACCTGGTGGGTTGCACCGTACTGGAGGCGGGCCCCAACGTGGTGACCCAGGTGAAGACCGTGGAGAAGGACGGGTATGCGGCCGTGCAGCTGGCCTATGGCGAGCGCAAGGAGAAGAACACGCCCGCGGCGGCCATCGGCCACTTCAAGAAGGCCAACACCACGCCCAAGGCAAAGAGCTTCGAGTTCAAGGAATTCGGGGGCGAGCTCAAGCTGGGCGACCAGGTGGACCTGGGCATCTTCGAGGAAGGTTCCTGGGTGGCCGTCACCGGCACAAGCAAGGGCAAGGGCTTCCAAGGCGTGGTGAAGCGCCATGGCTTCAGCGGCGTGGGCGAAAGCACCCATGGCCAGCACGACCGTTCCCGCGCCCCGGGGTCGGTGGGTGCTTCCTCGTACCCCTCCCGGGTGTTCAAGGGCCAGCGCATGGCCGGCCGTATGGGCGGCGAGCGGGTCTCCATCGAGAACCTGCGCATCGTGAAACTGGACAAGGAAAAGAACCTCATGGTCGTCGAAGGGTCCGTTCCCGGTCCCAAGGGCGGCTATGTCATCCTTTGGAAGTAA
PROTEIN sequence
Length: 206
MSGLIGKKIGMTSLYDGQGNLVGCTVLEAGPNVVTQVKTVEKDGYAAVQLAYGERKEKNTPAAAIGHFKKANTTPKAKSFEFKEFGGELKLGDQVDLGIFEEGSWVAVTGTSKGKGFQGVVKRHGFSGVGESTHGQHDRSRAPGSVGASSYPSRVFKGQRMAGRMGGERVSIENLRIVKLDKEKNLMVVEGSVPGPKGGYVILWK*