ggKbase home page
This organism can only be binned in the context of its binning project RIFCSPLOWO2_01_FULL. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

anamox1_curated_scaffold_11848_1

Organism: anamox1_Betaproteobacteria_69_7_curated

near complete RP 42 / 55 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1..528)

Top 3 Functional Annotations

Value Algorithm Source
UbiD family decarboxylase Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6P0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 218
  • Evalue 3.10e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 198.0
  • Bit_score: 120
  • Evalue 2.50e-25
Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 285
  • Evalue 2.90e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGGGCAAGGCAAACTGGTACGACATGCGCGAGTTCATCGCGCATCTGGAGAAGATCGGCGAGCTCGTGCGCATCAAGGACGAGGTCGACCCGAGCTGGGAGATCAACGGGCTCACGCGCATCGGCCTGCAGTCGCTCGCGCCGGCGCTCCTCTTCGAGCGCATCAAGGGCGCGGAGGTCCCGATGCTCACCAACCTGCTCGGCACCGGGCCGCGCTTCCTCGCCGCGCTCGGCATCGAGAAGTGGAGCGACTTCAACGCGGAGTGGTGCCGCCGCACCGAGCGCCTGGTCCCGCCGCGCGTCGTGCGCGACGCGCCGTGCCAGGAGGTGGTGATCGAGGGCGACGCCATCGACCTGCACAAGATCTGCAACACGGTCTGGCACCAGTACGACGGCGGCGAGTTTCCCGGCACGCTCTCGGTGTCGATCACCAAGGACCCGGAGAACGGCATCCTGAACGCCGGCATCTACCGCATGGGGACGCTGTCGAAGAACACGCTCGGCTGGGGCGCGCCCGAGTACACCCAC
PROTEIN sequence
Length: 176
VGKANWYDMREFIAHLEKIGELVRIKDEVDPSWEINGLTRIGLQSLAPALLFERIKGAEVPMLTNLLGTGPRFLAALGIEKWSDFNAEWCRRTERLVPPRVVRDAPCQEVVIEGDAIDLHKICNTVWHQYDGGEFPGTLSVSITKDPENGILNAGIYRMGTLSKNTLGWGAPEYTH